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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS16505 and A4249_RS04225 are separated by 25 nucleotides
A4249_RS04225 and A4249_RS04230 are separated by 199 nucleotides
A4249_RS04230 and A4249_RS04235 are separated by 138 nucleotides
A4249_RS04235 and A4249_RS04240 overlap by 4 nucleotides
A4249_RS16505: A4249_RS16505 - SEC-C metal-binding domain-containing protein, at 873,552 to 874,682
_RS16505
A4249_RS04225: A4249_RS04225 - DNA mismatch repair endonuclease MutL, at 874,708 to 876,600
_RS04225
A4249_RS04230: A4249_RS04230 - type I DNA topoisomerase, at 876,800 to 879,406
_RS04230
A4249_RS04235: A4249_RS04235 - hypothetical protein, at 879,545 to 879,739
_RS04235
A4249_RS04240: A4249_RS04240 - DNA-processing protein DprA, at 879,736 to 880,809
_RS04240
Group
Condition
A4249
_RS16505
A4249
_RS04225
A4249
_RS04230
A4249
_RS04235
A4249
_RS04240
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.9
-0.0
N.D.
-0.0
-0.2
carbon source
D-Glucose (C); 30C
-0.2
-0.1
N.D.
-0.8
-0.1
carbon source
D-Glucose (C); 20C
-0.5
-0.0
N.D.
-0.2
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.0
-0.0
N.D.
-0.0
-0.4
carbon source
Guanosine 0.35306 mM (C)
-0.3
+0.1
N.D.
-0.1
-0.2
carbon source
Adenine 0.74 mM (C)
-0.3
-0.0
N.D.
-0.1
-0.1
carbon source
Xanthine 0.6574 mM (C)
-0.4
+0.0
N.D.
+0.1
-0.2
carbon source
Inosine 0.3728 mM (C)
+0.1
-0.1
N.D.
-0.2
-0.0
carbon source
Guanine 0.6617 mM (C)
-0.2
+0.0
N.D.
+0.1
-0.2
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.0
N.D.
+0.0
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.1
N.D.
-0.0
-0.4
carbon source
Hypoxanthine 0.7347 mM (C)
-0.3
+0.0
N.D.
+0.0
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.1
N.D.
-0.1
-0.3
carbon source
Adenine 0.74 mM (C)
-0.1
+0.1
N.D.
-0.0
-0.1
carbon source
Cytosine 0.9 mM (C)
-0.2
-0.0
N.D.
+0.1
+0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.3
-0.0
N.D.
-0.3
-0.1
carbon source
Inosine 0.3728 mM (C)
-0.1
+0.1
N.D.
-0.0
+0.0
carbon source
Guanine 0.6617 mM (C)
+0.0
+0.1
N.D.
+0.1
-0.3
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.0
N.D.
+0.0
+0.1
carbon source
Thymine 0.793 mM (C)
-0.1
+0.1
N.D.
+0.1
-0.1
carbon source
Tween 20 (C), 20C
-0.2
-0.0
N.D.
-0.1
+0.3
carbon source
Xanthine 0.6574 mM (C)
-0.2
+0.1
N.D.
+0.1
+0.1
carbon source
Tween 20 (C), 30C
-0.0
+0.1
N.D.
-0.2
+0.2
carbon source
Thymine 0.793 mM (C)
+0.2
-0.0
N.D.
-0.0
-0.1
carbon source
Uracil 0.8921 mM (C)
+0.3
+0.1
N.D.
-0.1
-0.2
carbon source
Cytosine 0.9 mM (C)
+0.0
+0.1
N.D.
+0.0
-0.0
carbon source
Thymine 0.793 mM (C)
+0.0
+0.0
N.D.
+0.1
-0.0
carbon source
Guanine 0.6617 mM (C)
+0.2
+0.0
N.D.
+0.1
-0.2
carbon source
Adenine 0.74 mM (C)
-0.1
+0.0
N.D.
-0.1
+0.3
carbon source
Cytidine 0.41115 mM (C)
-0.0
+0.1
N.D.
-0.1
+0.4
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