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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS04120 and A4249_RS04125 are separated by 52 nucleotides
A4249_RS04125 and A4249_RS04130 overlap by 1 nucleotides
A4249_RS04130 and A4249_RS04135 are separated by 110 nucleotides
A4249_RS04135 and A4249_RS04140 overlap by 16 nucleotides
A4249_RS04120: A4249_RS04120 - cisplatin damage response ATP-dependent DNA ligase, at 856,103 to 857,791
_RS04120
A4249_RS04125: A4249_RS04125 - mechanosensitive ion channel family protein, at 857,844 to 858,797
_RS04125
A4249_RS04130: A4249_RS04130 - beta-eliminating lyase-related protein, at 858,797 to 859,813
_RS04130
A4249_RS04135: A4249_RS04135 - ABC transporter ATP-binding protein/permease, at 859,924 to 861,774
_RS04135
A4249_RS04140: A4249_RS04140 - chemotaxis protein CheE, at 861,759 to 862,238
_RS04140
Group
Condition
A4249
_RS04120
A4249
_RS04125
A4249
_RS04130
A4249
_RS04135
A4249
_RS04140
carbon source
Tween 20 (C), 30C
+0.1
-1.8
-0.8
-0.0
+0.2
carbon source
Guanine 0.6617 mM (C)
+0.0
-1.1
-0.2
-0.0
-0.1
carbon source
Cytidine 0.41115 mM (C)
-0.1
-1.0
-0.1
+0.0
-0.3
carbon source
D-Glucose (C); 30C
+0.1
-1.1
-0.4
-0.4
+0.3
carbon source
Adenine 0.74 mM (C)
+0.1
-1.2
+0.0
-0.0
-0.2
carbon source
Hypoxanthine 0.7347 mM (C)
-0.2
-1.1
+0.0
-0.0
+0.1
carbon source
D-Glucose (C); 20C
+0.1
-1.6
+0.2
-0.1
+0.4
carbon source
Tween 20 (C), 20C
+0.0
-0.7
-0.4
-0.1
+0.2
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
-0.2
+0.4
-0.1
-0.8
carbon source
Xanthine 0.6574 mM (C)
+0.0
-0.7
-0.1
-0.0
+0.0
carbon source
Inosine 0.3728 mM (C)
-0.0
-0.3
+0.0
-0.2
-0.2
carbon source
Uracil 0.8921 mM (C)
-0.1
-0.3
-0.1
-0.0
-0.2
carbon source
Uracil 0.8921 mM (C)
-0.1
-0.3
-0.1
+0.0
-0.2
carbon source
Adenine 0.74 mM (C)
+0.0
-0.6
-0.0
-0.1
+0.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.0
-0.5
-0.0
-0.1
+0.2
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.0
-0.3
-0.1
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.2
+0.1
-0.0
-0.1
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.4
+0.2
+0.0
+0.1
carbon source
Cytosine 0.9 mM (C)
-0.0
-0.4
+0.1
-0.0
+0.3
carbon source
Thymine 0.793 mM (C)
-0.0
-0.2
+0.0
+0.0
+0.1
carbon source
Xanthine 0.6574 mM (C)
-0.0
-0.3
+0.2
-0.0
+0.2
carbon source
Cytosine 0.9 mM (C)
+0.0
+0.3
-0.1
-0.1
-0.1
carbon source
Thymine 0.793 mM (C)
+0.0
-0.2
-0.0
-0.0
+0.3
carbon source
Thymine 0.793 mM (C)
-0.1
+0.2
-0.0
-0.0
-0.0
carbon source
Inosine 0.3728 mM (C)
+0.1
-0.5
+0.3
+0.1
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.0
+0.3
+0.0
+0.0
-0.2
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.0
-0.2
+0.1
-0.1
+0.4
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.2
+0.1
+0.1
+0.0
carbon source
Adenine 0.74 mM (C)
+0.0
+0.4
-0.0
-0.1
+0.3
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.8
+0.2
-0.0
-0.0
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