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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS02375 and A4249_RS02380 overlap by 4 nucleotides
A4249_RS02380 and A4249_RS02385 overlap by 16 nucleotides
A4249_RS02385 and A4249_RS02390 are separated by 28 nucleotides
A4249_RS02390 and A4249_RS02395 overlap by 14 nucleotides
A4249_RS02375: A4249_RS02375 - TolC family protein, at 504,937 to 506,460
_RS02375
A4249_RS02380: A4249_RS02380 - HlyD family secretion protein, at 506,457 to 507,518
_RS02380
A4249_RS02385: A4249_RS02385 - ABC transporter permease, at 507,503 to 509,830
_RS02385
A4249_RS02390: A4249_RS02390 - TonB-dependent receptor, at 509,859 to 512,333
_RS02390
A4249_RS02395: A4249_RS02395 - FecR domain-containing protein, at 512,320 to 513,270
_RS02395
Group
Condition
A4249
_RS02375
A4249
_RS02380
A4249
_RS02385
A4249
_RS02390
A4249
_RS02395
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.3
+0.1
-0.1
-0.7
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
-0.1
-0.0
-0.2
-0.4
carbon source
Thymine 0.793 mM (C)
-0.0
-0.2
+0.1
-0.1
-0.4
carbon source
Guanosine 0.35306 mM (C)
+0.0
-0.4
-0.0
-0.2
-0.0
carbon source
Cytosine 0.9 mM (C)
+0.0
-0.1
+0.1
-0.1
-0.4
carbon source
Tween 20 (C), 30C
-0.2
-0.2
-0.3
-0.2
+0.4
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.0
-0.1
-0.0
+0.0
-0.3
carbon source
Adenine 0.74 mM (C)
-0.1
-0.2
+0.0
-0.0
-0.1
carbon source
Cytidine 0.41115 mM (C)
-0.0
+0.0
+0.0
-0.1
-0.3
carbon source
Adenine 0.74 mM (C)
+0.0
-0.0
+0.1
-0.1
-0.3
carbon source
Guanine 0.6617 mM (C)
+0.0
-0.2
-0.1
-0.1
+0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.2
+0.0
-0.2
-0.4
carbon source
Inosine 0.3728 mM (C)
-0.1
-0.3
+0.1
-0.1
+0.2
carbon source
Guanine 0.6617 mM (C)
+0.0
-0.2
+0.0
-0.1
-0.0
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.0
+0.0
-0.1
-0.2
carbon source
Cytosine 0.9 mM (C)
+0.0
+0.0
+0.0
-0.1
-0.2
carbon source
Thymine 0.793 mM (C)
+0.0
-0.1
+0.0
-0.2
-0.0
carbon source
Uracil 0.8921 mM (C)
-0.0
-0.1
+0.0
-0.1
-0.1
carbon source
Adenine 0.74 mM (C)
+0.0
+0.0
-0.0
-0.1
-0.1
carbon source
Tween 20 (C), 20C
-0.1
-0.2
-0.0
-0.1
+0.1
carbon source
Xanthine 0.6574 mM (C)
+0.0
-0.1
+0.1
-0.1
-0.1
carbon source
D-Glucose (C); 20C
+0.1
-0.3
+0.1
-0.1
+0.0
carbon source
Cytosine 0.9 mM (C)
-0.1
+0.0
+0.0
-0.1
-0.0
carbon source
Xanthine 0.6574 mM (C)
-0.1
-0.2
-0.1
-0.1
+0.3
carbon source
Thymine 0.793 mM (C)
+0.0
-0.1
+0.0
-0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.0
+0.1
+0.1
-0.1
-0.1
carbon source
D-Glucose (C); 30C
+0.1
-0.1
+0.0
-0.4
+0.4
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.0
-0.1
+0.1
+0.1
-0.0
carbon source
Inosine 0.3728 mM (C)
+0.0
-0.3
-0.0
-0.1
+0.4
carbon source
Guanosine 0.35306 mM (C)
+0.1
+0.0
+0.1
-0.0
+0.0
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A4249_RS02385
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