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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS01595 and A4249_RS16715 are separated by 7 nucleotides
A4249_RS16715 and A4249_RS01600 are separated by 50 nucleotides
A4249_RS01600 and A4249_RS01605 are separated by 13 nucleotides
A4249_RS01605 and A4249_RS01610 overlap by 1 nucleotides
A4249_RS01595: A4249_RS01595 - hypothetical protein, at 302,159 to 302,362
_RS01595
A4249_RS16715: A4249_RS16715 - hypothetical protein, at 302,370 to 302,546
_RS16715
A4249_RS01600: A4249_RS01600 - HlyD family secretion protein, at 302,597 to 303,712
_RS01600
A4249_RS01605: A4249_RS01605 - MFS transporter, at 303,726 to 305,423
_RS01605
A4249_RS01610: A4249_RS01610 - TetR/AcrR family transcriptional regulator, at 305,423 to 305,998
_RS01610
Group
Condition
A4249
_RS01595
A4249
_RS16715
A4249
_RS01600
A4249
_RS01605
A4249
_RS01610
carbon source
Tween 20 (C), 20C
-0.2
N.D.
-1.1
-1.0
-0.3
carbon source
Tween 20 (C), 30C
-0.1
N.D.
-1.1
-1.2
+0.4
carbon source
Guanosine 0.35306 mM (C)
+0.1
N.D.
+0.0
-0.0
-1.5
carbon source
Guanosine 0.35306 mM (C)
-0.0
N.D.
+0.0
-0.1
-1.1
carbon source
D-Glucose (C); 30C
-0.2
N.D.
-0.0
-0.0
-0.6
carbon source
Cytosine 0.9 mM (C)
-0.2
N.D.
+0.1
+0.1
-0.8
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
+0.0
-0.1
-0.5
carbon source
Guanosine 0.35306 mM (C)
-0.0
N.D.
-0.0
-0.0
-0.6
carbon source
Inosine 0.3728 mM (C)
-0.1
N.D.
-0.1
+0.1
-0.5
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.1
N.D.
+0.0
+0.1
-0.5
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
N.D.
+0.1
+0.1
-0.6
carbon source
Uracil 0.8921 mM (C)
+0.2
N.D.
-0.0
+0.1
-0.6
carbon source
Cytosine 0.9 mM (C)
-0.1
N.D.
+0.1
-0.0
-0.3
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.1
N.D.
+0.0
+0.0
-0.5
carbon source
Cytosine 0.9 mM (C)
+0.1
N.D.
+0.1
+0.0
-0.5
carbon source
Thymine 0.793 mM (C)
+0.3
N.D.
+0.1
+0.0
-0.7
carbon source
Thymine 0.793 mM (C)
-0.0
N.D.
-0.0
+0.0
-0.3
carbon source
D-Glucose (C); 20C
-0.2
N.D.
+0.1
-0.0
-0.1
carbon source
Inosine 0.3728 mM (C)
-0.2
N.D.
-0.0
+0.0
-0.1
carbon source
Uracil 0.8921 mM (C)
-0.0
N.D.
-0.0
+0.1
-0.2
carbon source
Xanthine 0.6574 mM (C)
+0.1
N.D.
+0.0
+0.0
-0.1
carbon source
Adenine 0.74 mM (C)
+0.2
N.D.
-0.1
+0.0
-0.1
carbon source
Thymine 0.793 mM (C)
+0.0
N.D.
+0.1
+0.0
+0.2
carbon source
Xanthine 0.6574 mM (C)
+0.0
N.D.
+0.0
+0.1
+0.3
carbon source
Guanine 0.6617 mM (C)
-0.2
N.D.
+0.1
-0.1
+0.6
carbon source
Guanine 0.6617 mM (C)
+0.1
N.D.
-0.1
+0.1
+0.3
carbon source
Cytidine 0.41115 mM (C)
+0.2
N.D.
+0.0
-0.0
+0.3
carbon source
Guanine 0.6617 mM (C)
+0.2
N.D.
+0.1
-0.0
+0.4
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
N.D.
+0.0
+0.0
+0.4
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
N.D.
+0.0
+0.1
+0.8
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A4249_RS01600
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