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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS00960 and A4249_RS00965 are separated by 100 nucleotides
A4249_RS00965 and A4249_RS00970 overlap by 1 nucleotides
A4249_RS00970 and A4249_RS00975 are separated by 129 nucleotides
A4249_RS00975 and A4249_RS00980 are separated by 209 nucleotides
A4249_RS00960: A4249_RS00960 - fasciclin domain-containing protein, at 178,954 to 179,850
_RS00960
A4249_RS00965: A4249_RS00965 - glycine--tRNA ligase subunit alpha, at 179,951 to 180,844
_RS00965
A4249_RS00970: A4249_RS00970 - glycine--tRNA ligase subunit beta, at 180,844 to 183,009
_RS00970
A4249_RS00975: A4249_RS00975 - DUF559 domain-containing protein, at 183,139 to 183,492
_RS00975
A4249_RS00980: A4249_RS00980 - pyruvate, phosphate dikinase, at 183,702 to 186,383
_RS00980
Group
Condition
A4249
_RS00960
A4249
_RS00965
A4249
_RS00970
A4249
_RS00975
A4249
_RS00980
carbon source
Tween 20 (C), 20C
-0.3
N.D.
N.D.
-0.4
-4.5
carbon source
Tween 20 (C), 30C
-0.2
N.D.
N.D.
-0.2
-4.5
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.2
N.D.
N.D.
-0.5
-0.2
carbon source
Cytidine 0.41115 mM (C)
-0.1
N.D.
N.D.
-0.1
-0.3
carbon source
D-Glucose (C); 30C
-0.1
N.D.
N.D.
-0.5
+0.3
carbon source
D-Glucose (C); 20C
-0.2
N.D.
N.D.
-0.1
+0.1
carbon source
Thymine 0.793 mM (C)
-0.1
N.D.
N.D.
-0.3
+0.5
carbon source
Xanthine 0.6574 mM (C)
-0.1
N.D.
N.D.
-0.2
+0.3
carbon source
Xanthine 0.6574 mM (C)
-0.0
N.D.
N.D.
-0.2
+0.3
carbon source
Cytosine 0.9 mM (C)
-0.0
N.D.
N.D.
-0.3
+0.5
carbon source
Adenine 0.74 mM (C)
+0.0
N.D.
N.D.
-0.3
+0.4
carbon source
Inosine 0.3728 mM (C)
-0.2
N.D.
N.D.
-0.3
+0.8
carbon source
Adenine 0.74 mM (C)
-0.1
N.D.
N.D.
-0.0
+0.4
carbon source
Guanine 0.6617 mM (C)
+0.0
N.D.
N.D.
-0.1
+0.5
carbon source
Cytosine 0.9 mM (C)
+0.2
N.D.
N.D.
-0.1
+0.4
carbon source
Cytosine 0.9 mM (C)
+0.1
N.D.
N.D.
-0.1
+0.4
carbon source
Guanine 0.6617 mM (C)
-0.1
N.D.
N.D.
-0.1
+0.6
carbon source
Uracil 0.8921 mM (C)
+0.1
N.D.
N.D.
-0.1
+0.4
carbon source
Thymine 0.793 mM (C)
-0.0
N.D.
N.D.
+0.0
+0.5
carbon source
Adenine 0.74 mM (C)
+0.0
N.D.
N.D.
+0.0
+0.5
carbon source
Thymine 0.793 mM (C)
+0.2
N.D.
N.D.
-0.2
+0.5
carbon source
Guanosine 0.35306 mM (C)
+0.1
N.D.
N.D.
-0.4
+0.9
carbon source
Uracil 0.8921 mM (C)
+0.2
N.D.
N.D.
+0.1
+0.4
carbon source
Guanosine 0.35306 mM (C)
+0.0
N.D.
N.D.
-0.2
+0.9
carbon source
Guanine 0.6617 mM (C)
+0.2
N.D.
N.D.
-0.1
+0.7
carbon source
Hypoxanthine 0.7347 mM (C)
-0.2
N.D.
N.D.
-0.2
+1.3
carbon source
Inosine 0.3728 mM (C)
-0.0
N.D.
N.D.
-0.2
+1.1
carbon source
Guanosine 0.35306 mM (C)
-0.1
N.D.
N.D.
+0.2
+1.0
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
N.D.
N.D.
+0.1
+1.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
N.D.
N.D.
-0.1
+1.1
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