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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS00745 and A4249_RS00750 are separated by 50 nucleotides
A4249_RS00750 and A4249_RS00755 are separated by 1 nucleotides
A4249_RS00755 and A4249_RS00760 overlap by 17 nucleotides
A4249_RS00760 and A4249_RS00765 are separated by 252 nucleotides
A4249_RS00745: A4249_RS00745 - SDR family NAD(P)-dependent oxidoreductase, at 140,476 to 141,186
_RS00745
A4249_RS00750: A4249_RS00750 - S41 family peptidase, at 141,237 to 142,508
_RS00750
A4249_RS00755: A4249_RS00755 - YbdD/YjiX family protein, at 142,510 to 142,749
_RS00755
A4249_RS00760: A4249_RS00760 - carbon starvation CstA family protein, at 142,733 to 144,820
_RS00760
A4249_RS00765: A4249_RS00765 - formate-dependent phosphoribosylglycinamide formyltransferase, at 145,073 to 146,269
_RS00765
Group
Condition
A4249
_RS00745
A4249
_RS00750
A4249
_RS00755
A4249
_RS00760
A4249
_RS00765
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.3
+0.1
-0.3
-0.2
-0.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.3
-0.1
-0.3
-0.2
+0.1
carbon source
Guanine 0.6617 mM (C)
-0.2
-0.0
-0.0
-0.2
-0.3
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.0
-0.3
-0.0
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.2
+0.1
+0.0
-0.1
-0.0
carbon source
Xanthine 0.6574 mM (C)
+0.0
-0.2
-0.1
+0.1
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
-0.2
-0.1
+0.1
+0.1
carbon source
Cytidine 0.41115 mM (C)
-0.1
-0.2
+0.0
+0.3
-0.3
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.2
+0.1
-0.0
+0.1
carbon source
Adenine 0.74 mM (C)
+0.1
+0.1
-0.3
-0.0
-0.0
carbon source
Xanthine 0.6574 mM (C)
-0.2
-0.1
+0.2
+0.0
-0.1
carbon source
Cytosine 0.9 mM (C)
+0.1
-0.1
-0.2
+0.1
-0.1
carbon source
Adenine 0.74 mM (C)
+0.0
-0.1
+0.0
+0.0
-0.1
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.1
-0.1
+0.2
-0.0
carbon source
Guanine 0.6617 mM (C)
+0.2
-0.1
+0.0
-0.1
-0.0
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
-0.0
+0.1
-0.2
carbon source
Uracil 0.8921 mM (C)
+0.1
-0.1
+0.2
-0.1
-0.1
carbon source
Guanosine 0.35306 mM (C)
-0.1
+0.2
+0.1
-0.0
-0.1
carbon source
Uracil 0.8921 mM (C)
+0.1
-0.1
+0.1
-0.0
+0.0
carbon source
Thymine 0.793 mM (C)
+0.1
-0.1
+0.2
+0.0
-0.2
carbon source
Adenine 0.74 mM (C)
+0.0
+0.1
+0.0
-0.2
+0.1
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.1
+0.1
+0.2
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.2
-0.1
-0.1
-0.0
+0.1
carbon source
Thymine 0.793 mM (C)
+0.3
-0.2
+0.1
+0.0
-0.1
carbon source
D-Glucose (C); 30C
+0.0
-0.3
+0.1
-0.3
+0.8
carbon source
Tween 20 (C), 20C
+0.2
-0.2
+0.2
-0.3
+0.4
carbon source
Tween 20 (C), 30C
-0.1
-0.0
+0.5
-0.5
+0.6
carbon source
Inosine 0.3728 mM (C)
+0.2
+0.1
+0.3
+0.0
-0.0
carbon source
Inosine 0.3728 mM (C)
+0.1
-0.1
+0.4
+0.2
-0.0
carbon source
D-Glucose (C); 20C
+0.1
-0.1
+0.6
-0.2
+0.4
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