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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS16440 and A4249_RS00550 are separated by 456 nucleotides
A4249_RS00550 and A4249_RS00555 are separated by 132 nucleotides
A4249_RS00555 and A4249_RS00560 are separated by 184 nucleotides
A4249_RS00560 and A4249_RS00565 are separated by 145 nucleotides
A4249_RS16440: A4249_RS16440 - hypothetical protein, at 93,355 to 93,981
_RS16440
A4249_RS00550: A4249_RS00550 - hypothetical protein, at 94,438 to 94,824
_RS00550
A4249_RS00555: A4249_RS00555 - excinuclease ABC subunit UvrB, at 94,957 to 97,185
_RS00555
A4249_RS00560: A4249_RS00560 - class I SAM-dependent DNA methyltransferase, at 97,370 to 100,786
_RS00560
A4249_RS00565: A4249_RS00565 - helix-turn-helix transcriptional regulator, at 100,932 to 101,267
_RS00565
Group
Condition
A4249
_RS16440
A4249
_RS00550
A4249
_RS00555
A4249
_RS00560
A4249
_RS00565
carbon source
D-Glucose (C); 30C
-0.1
-0.3
-0.3
+0.0
-0.2
carbon source
Tween 20 (C), 20C
-0.2
-0.1
-0.5
+0.0
-0.0
carbon source
D-Glucose (C); 20C
+0.0
-0.1
-0.4
+0.1
-0.1
carbon source
Tween 20 (C), 30C
-0.0
+0.1
-0.4
+0.1
-0.2
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
-0.1
-0.1
-0.0
-0.1
carbon source
Xanthine 0.6574 mM (C)
-0.3
+0.0
-0.1
-0.1
-0.0
carbon source
Guanosine 0.35306 mM (C)
-0.2
-0.0
-0.0
-0.0
-0.2
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.3
-0.2
-0.1
-0.0
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.3
-0.1
+0.1
-0.0
-0.0
carbon source
Guanosine 0.35306 mM (C)
-0.2
-0.2
+0.1
+0.0
-0.0
carbon source
Inosine 0.3728 mM (C)
-0.2
-0.0
-0.1
-0.1
-0.0
carbon source
Xanthine 0.6574 mM (C)
-0.1
-0.1
-0.1
+0.0
+0.0
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.0
+0.0
-0.1
-0.0
-0.1
carbon source
Thymine 0.793 mM (C)
-0.1
-0.1
-0.0
-0.0
+0.2
carbon source
Cytosine 0.9 mM (C)
-0.2
-0.0
-0.1
-0.0
+0.1
carbon source
Guanine 0.6617 mM (C)
-0.0
-0.0
-0.0
-0.0
-0.1
carbon source
Thymine 0.793 mM (C)
-0.1
-0.0
+0.0
-0.0
+0.0
carbon source
Cytidine 0.41115 mM (C)
+0.0
-0.1
-0.0
-0.1
+0.0
carbon source
Uracil 0.8921 mM (C)
+0.0
-0.0
+0.0
-0.0
-0.0
carbon source
Adenine 0.74 mM (C)
-0.0
-0.0
+0.1
+0.0
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
+0.0
-0.0
-0.1
+0.2
carbon source
Guanine 0.6617 mM (C)
-0.1
-0.1
-0.0
-0.0
+0.2
carbon source
Inosine 0.3728 mM (C)
+0.1
-0.0
+0.0
+0.0
-0.1
carbon source
Cytosine 0.9 mM (C)
-0.1
-0.1
-0.1
-0.0
+0.3
carbon source
Thymine 0.793 mM (C)
-0.1
+0.0
-0.0
+0.0
+0.2
carbon source
Guanine 0.6617 mM (C)
-0.1
+0.0
+0.0
+0.0
+0.1
carbon source
Adenine 0.74 mM (C)
-0.1
+0.1
+0.0
-0.0
+0.1
carbon source
Cytosine 0.9 mM (C)
+0.0
-0.0
+0.1
-0.0
+0.1
carbon source
Uracil 0.8921 mM (C)
+0.0
+0.1
+0.1
+0.1
+0.1
carbon source
Adenine 0.74 mM (C)
+0.0
+0.2
-0.0
-0.0
+0.2
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A4249_RS00555
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