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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS00450 and A4249_RS00455 overlap by 4 nucleotides
A4249_RS00455 and A4249_RS00460 are separated by 250 nucleotides
A4249_RS00460 and A4249_RS00465 are separated by 195 nucleotides
A4249_RS00465 and A4249_RS00470 are separated by 95 nucleotides
A4249_RS00450: A4249_RS00450 - MBL fold metallo-hydrolase, at 75,387 to 76,325
_RS00450
A4249_RS00455: A4249_RS00455 - hypothetical protein, at 76,322 to 76,543
_RS00455
A4249_RS00460: A4249_RS00460 - 30S ribosomal protein S4, at 76,794 to 77,411
_RS00460
A4249_RS00465: A4249_RS00465 - hypothetical protein, at 77,607 to 77,987
_RS00465
A4249_RS00470: A4249_RS00470 - bifunctional diguanylate cyclase/phosphodiesterase, at 78,083 to 80,434
_RS00470
Group
Condition
A4249
_RS00450
A4249
_RS00455
A4249
_RS00460
A4249
_RS00465
A4249
_RS00470
carbon source
Adenine 0.74 mM (C)
-0.2
N.D.
N.D.
N.D.
-0.2
carbon source
Cytosine 0.9 mM (C)
-0.1
N.D.
N.D.
N.D.
-0.1
carbon source
D-Glucose (C); 30C
-0.1
N.D.
N.D.
N.D.
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.2
N.D.
N.D.
N.D.
-0.0
carbon source
Guanosine 0.35306 mM (C)
-0.0
N.D.
N.D.
N.D.
-0.1
carbon source
Adenine 0.74 mM (C)
-0.2
N.D.
N.D.
N.D.
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.2
N.D.
N.D.
N.D.
+0.1
carbon source
Thymine 0.793 mM (C)
-0.1
N.D.
N.D.
N.D.
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
N.D.
N.D.
N.D.
-0.0
carbon source
Inosine 0.3728 mM (C)
-0.1
N.D.
N.D.
N.D.
+0.0
carbon source
Cytosine 0.9 mM (C)
+0.0
N.D.
N.D.
N.D.
-0.1
carbon source
Inosine 0.3728 mM (C)
-0.0
N.D.
N.D.
N.D.
-0.1
carbon source
Hypoxanthine 0.7347 mM (C)
-0.1
N.D.
N.D.
N.D.
+0.0
carbon source
Cytosine 0.9 mM (C)
-0.1
N.D.
N.D.
N.D.
+0.0
carbon source
Guanine 0.6617 mM (C)
-0.1
N.D.
N.D.
N.D.
+0.0
carbon source
Adenine 0.74 mM (C)
-0.0
N.D.
N.D.
N.D.
-0.0
carbon source
Tween 20 (C), 20C
+0.1
N.D.
N.D.
N.D.
-0.2
carbon source
Uracil 0.8921 mM (C)
-0.1
N.D.
N.D.
N.D.
+0.0
carbon source
Xanthine 0.6574 mM (C)
-0.1
N.D.
N.D.
N.D.
+0.0
carbon source
Thymine 0.793 mM (C)
-0.0
N.D.
N.D.
N.D.
+0.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.0
N.D.
N.D.
N.D.
+0.1
carbon source
Cytidine 0.41115 mM (C)
-0.0
N.D.
N.D.
N.D.
+0.1
carbon source
Thymine 0.793 mM (C)
-0.1
N.D.
N.D.
N.D.
+0.1
carbon source
D-Glucose (C); 20C
+0.1
N.D.
N.D.
N.D.
-0.0
carbon source
Guanosine 0.35306 mM (C)
-0.1
N.D.
N.D.
N.D.
+0.1
carbon source
Guanine 0.6617 mM (C)
-0.0
N.D.
N.D.
N.D.
+0.1
carbon source
Tween 20 (C), 30C
+0.1
N.D.
N.D.
N.D.
-0.0
carbon source
Uracil 0.8921 mM (C)
+0.1
N.D.
N.D.
N.D.
+0.1
carbon source
Xanthine 0.6574 mM (C)
+0.0
N.D.
N.D.
N.D.
+0.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.1
N.D.
N.D.
N.D.
+0.2
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