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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS16425 and A4249_RS00410 are separated by 375 nucleotides
A4249_RS00410 and A4249_RS00415 are separated by 61 nucleotides
A4249_RS00415 and A4249_RS00420 are separated by 63 nucleotides
A4249_RS00420 and A4249_RS00425 are separated by 61 nucleotides
A4249_RS16425: A4249_RS16425 - hypothetical protein, at 68,531 to 69,388
_RS16425
A4249_RS00410: A4249_RS00410 - OmpA family protein, at 69,764 to 70,315
_RS00410
A4249_RS00415: A4249_RS00415 - NAD-dependent deacylase, at 70,377 to 71,087
_RS00415
A4249_RS00420: A4249_RS00420 - S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase, at 71,151 to 72,257
_RS00420
A4249_RS00425: A4249_RS00425 - VOC family protein, at 72,319 to 72,702
_RS00425
Group
Condition
A4249
_RS16425
A4249
_RS00410
A4249
_RS00415
A4249
_RS00420
A4249
_RS00425
carbon source
Cytidine 0.41115 mM (C)
-1.0
-0.3
+0.1
-0.2
+0.1
carbon source
Adenine 0.74 mM (C)
-0.4
-0.1
-0.4
-0.2
-0.1
carbon source
Guanosine 0.35306 mM (C)
-0.8
-0.1
-0.0
-0.0
+0.1
carbon source
Guanine 0.6617 mM (C)
-0.6
+0.1
+0.1
-0.0
-0.1
carbon source
Adenine 0.74 mM (C)
+0.4
-0.1
+0.0
-0.2
-0.4
carbon source
Cytosine 0.9 mM (C)
-0.4
+0.1
+0.1
-0.0
+0.0
carbon source
Guanosine 0.35306 mM (C)
-0.3
+0.0
+0.1
+0.1
-0.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.2
+0.1
+0.0
-0.1
-0.4
carbon source
Guanine 0.6617 mM (C)
+0.4
-0.0
-0.0
+0.1
-0.5
carbon source
Tween 20 (C), 20C
-0.0
-0.3
+0.1
+0.0
+0.1
carbon source
Tween 20 (C), 30C
-0.0
-0.3
+0.1
-0.1
+0.4
carbon source
Guanine 0.6617 mM (C)
+0.2
+0.1
+0.1
+0.0
-0.2
carbon source
Cytosine 0.9 mM (C)
+0.2
+0.1
+0.1
+0.1
-0.2
carbon source
Cytosine 0.9 mM (C)
+0.2
+0.2
+0.1
+0.0
-0.2
carbon source
Uracil 0.8921 mM (C)
+0.1
+0.1
+0.2
+0.1
-0.0
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.1
-0.1
+0.1
+0.3
carbon source
Uracil 0.8921 mM (C)
+0.6
-0.1
+0.1
+0.1
-0.2
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
+0.7
-0.2
+0.0
-0.0
+0.0
carbon source
Inosine 0.3728 mM (C)
+0.6
-0.1
+0.0
+0.0
-0.0
carbon source
Thymine 0.793 mM (C)
+0.5
-0.0
+0.1
+0.1
-0.1
carbon source
Inosine 0.3728 mM (C)
+0.3
+0.3
+0.0
+0.2
-0.2
carbon source
Xanthine 0.6574 mM (C)
+0.4
+0.1
+0.1
+0.1
-0.1
carbon source
Guanosine 0.35306 mM (C)
+0.7
-0.2
+0.1
-0.0
+0.1
carbon source
D-Glucose (C); 20C
+0.2
-0.2
+0.1
+0.1
+0.6
carbon source
Thymine 0.793 mM (C)
+0.5
+0.0
+0.1
+0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+0.5
+0.3
+0.2
+0.1
+0.1
carbon source
Hypoxanthine 0.7347 mM (C)
+1.1
+0.1
+0.0
-0.1
-0.0
carbon source
Thymine 0.793 mM (C)
+0.7
+0.1
+0.2
+0.1
+0.0
carbon source
D-Glucose (C); 30C
+0.7
-0.1
-0.1
+0.3
+0.5
carbon source
Xanthine 0.6574 mM (C)
+0.9
+0.2
+0.0
+0.1
+0.0
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A4249_RS00415
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