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Cofit
Protein
Homologs
Fitness for 5 genes in
Brevundimonas sp. GW460-12-10-14-LB2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
A4249_RS00045 and A4249_RS00050 are separated by 106 nucleotides
A4249_RS00050 and A4249_RS00055 overlap by 4 nucleotides
A4249_RS00055 and A4249_RS00060 are separated by 22 nucleotides
A4249_RS00060 and A4249_RS17000 are separated by 103 nucleotides
A4249_RS00045: A4249_RS00045 - hypothetical protein, at 8,734 to 9,123
_RS00045
A4249_RS00050: A4249_RS00050 - type 1 glutamine amidotransferase, at 9,230 to 9,796
_RS00050
A4249_RS00055: A4249_RS00055 - methyltransferase, at 9,793 to 10,443
_RS00055
A4249_RS00060: A4249_RS00060 - fatty acid desaturase, at 10,466 to 11,038
_RS00060
A4249_RS17000: A4249_RS17000 - hypothetical protein, at 11,142 to 11,201
_RS17000
Group
Condition
A4249
_RS00045
A4249
_RS00050
A4249
_RS00055
A4249
_RS00060
A4249
_RS17000
carbon source
Cytidine 0.41115 mM (C)
+0.1
-0.2
-0.1
-0.9
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.1
-0.4
-0.4
+0.3
N.D.
carbon source
Inosine 0.3728 mM (C)
+0.2
-0.8
-0.3
+0.2
N.D.
carbon source
D-Glucose (C); 30C
-0.1
-0.7
-0.1
+0.2
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
-0.0
-0.4
+0.1
-0.1
N.D.
carbon source
Thymine 0.793 mM (C)
-0.2
-0.7
+0.1
+0.4
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.2
-0.5
+0.1
-0.1
N.D.
carbon source
Guanosine 0.35306 mM (C)
-0.3
-0.2
-0.1
+0.4
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.2
-0.2
-0.0
-0.2
N.D.
carbon source
Xanthine 0.6574 mM (C)
-0.0
-0.4
+0.0
+0.3
N.D.
carbon source
Adenine 0.74 mM (C)
-0.1
-0.4
+0.3
+0.1
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.0
+0.3
-0.1
-0.3
N.D.
carbon source
D-Glucose (C); 20C
-0.2
+0.1
+0.1
-0.1
N.D.
carbon source
Guanosine 0.35306 mM (C)
+0.3
-0.1
-0.0
+0.0
N.D.
carbon source
Tween 20 (C), 20C
+0.0
-0.1
+0.3
+0.1
N.D.
carbon source
Adenine 0.74 mM (C)
+0.2
+0.0
-0.1
+0.3
N.D.
carbon source
Inosine 0.3728 mM (C)
+0.2
-0.6
+0.3
+0.5
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
-0.2
+0.2
+0.4
N.D.
carbon source
Xanthine 0.6574 mM (C)
-0.0
+0.4
+0.0
+0.1
N.D.
carbon source
Adenine 0.74 mM (C)
+0.0
+0.6
-0.0
-0.0
N.D.
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 ppm (C)
-0.0
+0.4
-0.1
+0.3
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.1
+0.3
-0.1
+0.3
N.D.
carbon source
Thymine 0.793 mM (C)
+0.1
+0.2
+0.2
+0.1
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.3
-0.1
+0.3
+0.2
N.D.
carbon source
Hypoxanthine 0.7347 mM (C)
+0.1
+0.7
+0.2
-0.1
N.D.
carbon source
Tween 20 (C), 30C
+0.3
+0.5
-0.2
+0.5
N.D.
carbon source
Cytosine 0.9 mM (C)
+0.2
+0.4
+0.5
+0.2
N.D.
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
+0.1
+0.7
+0.4
+0.3
N.D.
carbon source
Guanine 0.6617 mM (C)
+0.0
+0.9
+0.3
+0.4
N.D.
carbon source
Uracil 0.8921 mM (C)
+0.2
+0.9
+0.3
+0.2
N.D.
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