Fitness for 5 genes in Escherichia coli BW25113

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500 ntwzyE and rffM are separated by 2 nucleotidesrffM and yifK are separated by 190 nucleotidesyifK and argX are separated by 102 nucleotidesargX and hisR are separated by 57 nucleotides b3793: wzyE - putative enterobacterial common antigen polymerase (NCBI), at 3,976,624 to 3,977,976 wzyE b3794: rffM - putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI), at 3,977,979 to 3,978,719 rffM b3795: yifK - predicted transporter (NCBI), at 3,978,910 to 3,980,295 yifK b3796: argX - tRNA-Arg (NCBI), at 3,980,398 to 3,980,474 argX b3797: hisR - tRNA-His (NCBI), at 3,980,532 to 3,980,608 hisR
Group Condition b3793 b3794 b3795 b3796 b3797
wzyE rffM yifK argX hisR
stress octanol 0.08 vol% N.D. -5.9 -0.1 N.D. N.D.
mzaabcde mzaABCDE N.D. -5.5 -0.3 N.D. N.D.
mzaabcde mzaABCDE N.D. -5.3 -0.1 N.D. N.D.
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM N.D. -4.8 -0.3 N.D. N.D.
motility outer cut, LB soft agar motility assay N.D. -4.7 -0.2 N.D. N.D.
sir2-hera SIR2-HerA N.D. -4.8 -0.0 N.D. N.D.
ppi ppI N.D. -4.5 -0.1 N.D. N.D.
drt_type_3 DRT_type_3 N.D. -4.6 -0.0 N.D. N.D.
ppi ppI N.D. -4.4 -0.1 N.D. N.D.
micoeukaryotes Tetrahymena sp., Mixed culture-1 N.D. -4.5 +0.1 N.D. N.D.
mzaabcde mzaABCDE N.D. -4.2 -0.1 N.D. N.D.
stress Benzalkonium Chloride 0.004 mg/ml N.D. -3.4 -0.9 N.D. N.D.
gfp_control GFP_control N.D. -4.3 +0.1 N.D. N.D.
retron_ec_48_control retron_Ec_48_control N.D. -4.2 -0.0 N.D. N.D.
drt_type_3 DRT_type_3 N.D. -4.1 -0.0 N.D. N.D.
stress 2,4-Dinitrophenol 2 mM N.D. -4.0 -0.1 N.D. N.D.
carbon source a-Ketoglutaric (C) N.D. -4.1 +0.1 N.D. N.D.
sir2-hera SIR2-HerA N.D. -3.9 -0.0 N.D. N.D.
retron_ec_48_control retron_Ec_48_control N.D. -3.9 -0.0 N.D. N.D.
sir2-hera SIR2-HerA N.D. -3.9 -0.1 N.D. N.D.
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM N.D. -3.9 +0.0 N.D. N.D.
stress 2,4-Dinitrophenol 2 mM N.D. -3.8 +0.1 N.D. N.D.
gfp_control GFP_control N.D. -3.7 +0.0 N.D. N.D.
gfp_control GFP_control N.D. -3.5 -0.0 N.D. N.D.
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM N.D. -3.6 +0.1 N.D. N.D.
drt_type_3 DRT_type_3 N.D. -3.6 +0.1 N.D. N.D.
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM N.D. -3.3 -0.2 N.D. N.D.
phage phage N.D. -3.7 +0.3 N.D. N.D.
ppi ppI N.D. -3.3 -0.1 N.D. N.D.
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM N.D. -3.6 +0.2 N.D. N.D.
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