Fitness for 5 genes in Escherichia coli BW25113

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500 ntasnC and asnA are separated by 151 nucleotidesasnA and yieM are separated by 4 nucleotidesyieM and yieN overlap by 7 nucleotidesyieN and trkD are separated by 222 nucleotides b3743: asnC - DNA-binding transcriptional dual regulator (NCBI), at 3,924,568 to 3,925,026 asnC b3744: asnA - asparagine synthetase AsnA (NCBI), at 3,925,178 to 3,926,170 asnA b3745: yieM - predicted von Willibrand factor containing protein (NCBI), at 3,926,175 to 3,927,626 yieM b3746: yieN - putative 2-component regulator (VIMSS), at 3,927,620 to 3,929,116 yieN b3747: trkD - potassium transporter (NCBI), at 3,929,339 to 3,931,207 trkD
Group Condition b3743 b3744 b3745 b3746 b3747
asnC asnA yieM yieN trkD
stress LB Anaerobic with Chloramphenicol 0.00000390625 mM +0.1 +0.1 -1.4 -1.6 -0.0
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM -0.0 -0.0 -1.5 -1.2 +0.1
stress LB Anaerobic with Chloramphenicol 0.00000390625 mM +0.1 +0.1 -1.2 -1.4 -0.1
stress sodium fluoride 100 mM -0.1 -0.1 -1.3 -1.0 +0.1
carbon source Glycolic Acid (C) +0.0 +0.2 -0.9 -1.2 -0.3
sir2-hera SIR2-HerA -1.1 -1.0 +0.3 +0.2 +0.1
retron_ec_48_control retron_Ec_48_control -0.9 -1.2 +0.3 +0.2 +0.1
ppi ppI -0.8 -1.1 +0.3 +0.2 +0.1
sir2-hera SIR2-HerA -0.8 -1.1 +0.4 +0.2 +0.2
drt_type_3 DRT_type_3 -0.9 -1.0 +0.4 +0.3 +0.1
retron_ec_48_control retron_Ec_48_control -0.9 -1.2 +0.4 +0.3 +0.2
mzaabcde mzaABCDE -0.8 -1.1 +0.4 +0.4 +0.1
mzaabcde mzaABCDE -0.6 -1.1 +0.3 +0.2 +0.1
gfp_control GFP_control -0.6 -0.9 +0.4 +0.2 +0.1
drt_type_3 DRT_type_3 -0.6 -0.9 +0.4 +0.4 +0.1
stress LB Aerobic with Irgasan 0.0000003125 mM -0.3 +0.2 -0.7 -0.5 +0.6
retron_ec_48_control retron_Ec_48_control -0.6 -1.0 +0.4 +0.4 +0.2
stress Benzalkonium Chloride 0.004 mg/ml -0.4 +0.5 +0.6 +0.9 +0.1
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.4 +0.3 +0.7 +0.8 -0.3
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM -0.5 +0.4 +1.0 +0.8 +0.2
m9 anaerobic no stress control M9 anaerobic no stress control -0.1 +0.1 +1.1 +1.1 -0.0
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM -0.1 +0.2 +1.1 +1.0 -0.0
stress LB Anaerobic with Hygromycin B 0.00025 mM +0.2 +0.0 +1.1 +1.1 -0.1
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.2 +0.1 +1.5 +1.3 -0.1
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.1 +0.3 +1.2 +1.2 -0.2
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.2 -0.0 +1.4 +1.3 -0.1
stress Ciprofloxacin Hydrochloride 0.000156 mM +0.7 +0.8 +0.6 +0.5 +0.6
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.5 +0.4 +1.5 +1.4 -0.3
stress Ciprofloxacin Hydrochloride 0.0003 mM +0.9 +0.7 +0.7 +0.6 +0.6
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -0.4 +0.4 +1.5 +1.6 +0.5
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