Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b3680	b4556	b3683	b3684	b3685
		yidL	glvG	glvC	yidP	yidE
carbon source	carbon source D-Mannose 5mM	-0.6	-0.0	-0.2	-0.9	-0.0
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-0.6	-0.1	-0.1	-0.5	-0.3
control	PBS_cage_1_mouse_1_Cecum_40 hr	-0.1	-0.4	-0.0	-0.9	-0.2
carbon source	carbon source D-Mannose 1mM	-0.0	-0.2	-0.1	-0.5	-0.3
no stress control anaerobic	M9 no stress control; Anaerobic 24 hr	-0.0	+0.1	+0.1	-0.2	-0.9
stress	LB Anaerobic with Amoxicillin 0.0000078125 mM	+0.1	-0.3	-0.0	-0.3	-0.4
control	PBS_cage_1_mice _Feces_22 hr	-0.1	-0.0	+0.2	-1.0	+0.0
no stress control anaerobic	M9 no stress control; Anaerobic 24 hr	-0.0	-0.1	+0.1	-0.1	-0.9
phage	RB68	-0.2	-0.2	+0.2	-0.4	-0.3
no stress control anaerobic	M9 no stress control; Anaerobic 24 hr	+0.1	-0.0	+0.1	-0.1	-0.9
carbon source	carbon source D-Glucose 0.25mM	-0.3	-0.3	+0.0	-0.3	+0.2
stress	LB Anaerobic with Amoxicillin 0.0000078125 mM	+0.2	-0.2	+0.2	-0.5	-0.4
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-0.1	+0.2	+0.1	-0.7	-0.2
no stress control anaerobic	M9 no stress control; Anaerobic 48 hr	+0.1	+0.0	-0.0	+0.2	-0.9
stress	LB Anaerobic with Cefoxitin 0.000003125 mM	+0.3	-0.4	+0.1	-0.2	-0.3
control	PBS_cage_1_mice _Feces_40 hr	+0.0	-0.1	+0.2	-0.7	+0.1
motility	outer cut, LB soft agar motility assay	-0.3	+0.2	-0.4	+0.4	-0.2
stress	Cisplatin 0.1 mg/ml	-0.2	-0.6	-0.0	+0.0	+0.5
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-0.4	+0.6	+0.0	-0.1	-0.2
stress	octanol 0.08 vol%	+0.1	-0.2	-0.6	+0.5	+0.1
attachment_assay_attached_sample	Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	+0.5	+0.1	-0.1	-0.2	-0.2
stress	Benzalkonium Chloride 0.004 mg/ml	-0.2	-0.2	+0.0	+0.7	+0.1
control	PBS_cage_2_mouse_3_Cecum_40 hr	+0.3	+0.2	-0.0	-0.3	+0.3
stress	Chloramphenicol 0.005 mg/ml	+0.1	+0.0	-0.3	+0.5	+0.2
nophagecontrol	R1_N4_T1_phage0	+0.3	-0.3	+0.4	+0.0	+0.2
phage	T7_phage 0.00015625 MOI TC4	+0.5	+0.2	-0.1	+0.0	+0.2
phage	Ste41	+0.2	+0.2	+0.2	+0.5	-0.2
phage	T7_phage 0.0015625 MOI TC1	+0.5	+0.1	+0.0	+0.2	+0.3
predation	6 hr rep1_HD100_10fold_dilution_grewON	+0.5	-0.1	+0.2	+0.5	+0.2
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.0	+0.5	+0.3	+0.5	+0.3