Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b3484	b3485	b3486	b3487	b3488
		yhhI	yhhJ	rbbA	yhiI	yhiJ
carbon source	carbon source D-Glucose 0.25mM	-5.0	-0.4	+0.1	-0.2	+0.0
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-0.8	-0.4	-0.1	-0.8	-0.3
phage	T7_phage 0.0015625 MOI TC2	-2.5	-0.3	-0.1	+0.1	+0.3
stress	LB Aerobic with Ramoplanin 0.000125 mM	-1.7	+0.0	+0.2	-0.2	-0.2
predation	6 hr rep1_HD100_10fold_dilution_grewON	-1.8	-0.0	-0.1	+0.3	-0.3
stress	LB Anaerobic with Ticarcillin 0.00003125 mM	-1.4	-0.1	-0.0	-0.0	-0.2
stress	Aluminum chloride 5 mM	-1.5	-0.2	-0.1	+0.1	-0.1
motility	inner cut, LB soft agar motility assay	-0.6	-0.6	+0.0	-0.2	-0.2
carbon source	carbon source D-Glucose 0.25mM	-1.7	-0.3	+0.4	-0.1	+0.2
carbon source	carbon source D-Mannose 20mM	-1.4	+0.2	+0.1	-0.0	-0.3
stress	LB Anaerobic with Amoxicillin 0.0000078125 mM	-1.5	+0.1	-0.0	+0.1	-0.1
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-1.3	+0.1	+0.1	-0.0	-0.1
stress	LB Anaerobic with Hygromycin B 0.00025 mM	-1.1	-0.1	+0.0	+0.3	-0.2
phage	Ste41	+0.3	-0.6	-0.4	-0.1	-0.4
stress	3-methyl-1-butanol 1.25 vol%	-0.8	+0.2	-0.1	-0.3	+0.0
stress	LB Anaerobic with Amoxicillin 0.0000078125 mM	-1.4	-0.1	-0.1	+0.4	+0.2
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-1.1	+0.1	+0.1	+0.3	-0.4
stress	LB Anaerobic with Mecillinam 0.00003125 mM	-0.9	-0.1	-0.2	+0.3	+0.2
phage	Lambda_ci1857	-0.7	+0.3	-0.2	+0.2	-0.2
control	PBS_cage_1_mouse_1_Cecum_40 hr	-0.9	+0.3	-0.1	-0.4	+0.5
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-0.5	-0.4	+0.1	+0.5	-0.2
stress	Ciprofloxacin Hydrochloride 0.0003 mM	+0.5	-0.3	-0.1	-0.6	+0.1
stress	LB Anaerobic with Ceftriaxone hemi(heptahydrate) 0.000000625 mM	-0.7	-0.1	-0.0	+0.5	+0.2
carbon source	carbon source D-Mannose 5mM	+0.7	-0.1	+0.1	-0.1	-0.6
carbon source	carbon source D-Mannose 5mM	+1.2	-0.3	-0.1	-1.0	+0.4
control	PBS_cage_2_mouse_1_Cecum_40 hr	+0.7	-0.2	+0.3	-0.4	+0.2
phage	Δdbn_10	+0.7	-0.5	-0.1	+0.2	+0.4
stress	LB Aerobic with Zinc Pyrithione 0.0000025 mM	+1.1	-0.1	-0.0	-0.3	+0.1
stress	octanol 0.08 vol%	+1.2	-0.2	+0.2	+0.2	+0.2
attachment_assay_attached_sample	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	+1.4	+0.3	+0.3	+0.2	+0.3