Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b3106	b3107	b4470	b3110	b4471
		yhaK	yhaL	yhaM	yhaO	tdcG
stress	octanol 0.08 vol%	-0.8	-5.3	-0.1	-0.0	-0.2
carbon source	carbon source D-Glucose 0.25mM	-0.5	-5.9	+0.2	+0.2	-0.2
phage	Ste41	-0.4	-4.1	-0.1	+0.2	-0.3
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-0.0	-4.6	+0.2	-0.2	+0.1
motility	outer cut, LB soft agar motility assay	+0.8	-3.3	-1.0	+0.0	+0.2
protonated/deuterated	deuterated glucose in H2O	-0.1	-3.5	-0.1	+0.1	+0.2
stress	LB Anaerobic with Benzethonium chloride 0.00003125 mM	-1.3	-1.4	-0.4	-0.2	+0.1
phage	N4_phage 0.09375 MOI TC1	-0.2	-2.5	+0.0	-0.2	-0.2
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-0.6	-1.8	+0.3	-0.0	-0.2
phage	Phage_N4_cage_3_mouse_3_Cecum_40 hr	+0.1	-1.7	-0.6	+0.4	-0.3
stress	3-methyl-1-butanol 2.5 vol%	+0.1	-1.9	+0.0	+0.1	-0.1
phage	T7_phage 0.00015625 MOI TC4	-0.3	-1.1	+0.3	-0.1	-0.6
attachment_assay_attached_sample	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	+0.4	-2.0	-0.1	+0.1	+0.0
control	PBS_cage_2_mouse_2_Cecum_40 hr	-0.2	-1.4	-0.3	+0.2	+0.3
no phage control	Control_TnG	-0.3	-1.6	+0.2	+0.1	+0.1
phage	Lambda_ci1857	-1.3	-0.5	+0.2	+0.2	-0.1
carbon source	carbon source D-Glucose 5mM	+0.4	-2.2	+0.3	+0.3	-0.1
carbon source	LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C)	+0.4	-1.9	+0.2	-0.0	+0.1
micoeukaryotes	Tetrahymena sp., Mixed culture-1	+0.4	-1.1	-0.9	+0.2	+0.3
gfp_control	GFP_control	-0.1	-1.4	-0.2	+0.3	+0.3
motility	outer cut, LB soft agar motility assay	+0.5	-0.7	-0.6	+0.3	+0.3
stress	LB Anaerobic with Ceftriaxone hemi(heptahydrate) 0.000000625 mM	-0.7	+1.3	-0.1	+0.1	-0.1
carbon source	carbon source D-Mannose 0.5mM	-0.4	+1.4	-0.1	-0.1	+0.1
nitrogen source	L-Arginine (N)	+1.7	+0.2	-0.2	-0.2	-0.0
carbon source	carbon source D-Glucose 20mM	+0.1	+1.4	-0.4	+0.0	+0.3
carbon source	a-Ketoglutaric (C)	+1.0	+0.7	+0.0	-0.2	+0.3
stress	LB Anaerobic with Nitrofurantoin 0.00003125 mM	-0.3	+2.8	-0.2	-0.0	-0.2
control	PBS_cage_1_mouse_1_Cecum_40 hr	-0.2	+2.3	-0.6	+0.0	+0.5
nitrogen source	L-Arginine (N)	+1.8	+0.4	-0.0	-0.0	+0.1
stress	Chlorite 1.25 mM	+0.5	-0.8	+0.4	-0.3	+3.2