Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1179 experiments or choose conditions or try the comparative fitness browser

500 ntyjiM and yjiN are separated by 115 nucleotidesyjiN and yjiO are separated by 40 nucleotidesyjiO and yjiP are separated by 478 nucleotidesyjiP and yjiR are separated by 243 nucleotides b4335: yjiM - orf, hypothetical protein (VIMSS), at 4,562,722 to 4,563,873 yjiM b4336: yjiN - conserved inner membrane protein (NCBI), at 4,563,989 to 4,565,269 yjiN b4337: yjiO - multidrug efflux system protein (NCBI), at 4,565,310 to 4,566,542 yjiO b4339: yjiP - predicted transposase (RefSeq), at 4,567,021 to 4,567,941 yjiP b4340: yjiR - fused predicted DNA-binding transcriptional regulator/predicted aminotransferase (NCBI), at 4,568,185 to 4,569,597 yjiR
Group Condition b4335 b4336 b4337 b4339 b4340
yjiM yjiN yjiO yjiP yjiR
phage Δdbn_10 -0.4 -1.2 -0.6 -0.3 +0.0
phage RB68 -0.3 -0.7 -0.7 +0.2 -0.2
phage T7_phage 0.0015625 MOI TC2 +0.0 +0.3 -0.5 -0.5 -0.6
carbon source carbon source D-Glucose 0.25mM -0.2 +0.6 -1.2 -0.0 -0.3
carbon source carbon source D-Mannose 0.5mM -0.2 +0.1 -0.1 -0.4 -0.6
phage Lambda_ci1857 +0.0 -0.7 -0.2 -0.4 +0.3
predation 6 hr rep2_HD100_10fold_dilution_grewON -0.8 -0.1 -0.1 -0.2 +0.2
stress octanol 0.08 vol% +0.2 -0.5 -0.4 +0.2 -0.3
phage Ste41 +0.3 -0.3 -0.4 +0.1 -0.3
stress Chlorite 1.25 mM -0.3 +0.2 -0.9 +0.4 -0.1
stress LB Anaerobic with Furaltadone 0.000015625 mM +0.0 +0.4 -1.5 +0.2 +0.3
carbon source Ying_Others16 rep A; time point 2 -0.5 +0.3 -0.4 +0.2 -0.3
stress LB Anaerobic with Furaltadone 0.000015625 mM +0.2 +0.3 -1.6 +0.2 +0.3
stress undecene 5 vol% +0.0 +0.1 -0.8 +0.4 -0.1
stress limonene 1.25 vol% +0.2 +0.3 -0.8 +0.2 +0.1
stress Ciprofloxacin Hydrochloride 0.0003 mM -0.6 +0.7 -0.2 +0.2 -0.0
stress Cisplatin 0.1 mg/ml -0.0 -0.3 +0.5 +0.2 -0.3
stress limonene 2.5 vol% +0.2 +0.7 -0.6 -0.0 +0.1
stress undecene 5 vol% +0.0 +0.3 -0.8 +0.4 +0.3
stress limonene 2.5 vol% +0.0 +0.7 -0.7 +0.1 +0.0
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -0.6 +0.9 -0.1 +0.0 +0.2
motility outer cut, LB soft agar motility assay +0.1 -0.6 +0.5 +0.4 +0.1
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.6 -0.1 +0.3 -0.3 +0.1
motility inner cut, LB soft agar motility assay +0.4 -0.4 +0.2 +0.2 +0.3
stress limonene 5 vol% +0.2 +0.8 -0.3 +0.3 +0.1
stress LB Anaerobic with Ticarcillin 0.00003125 mM +0.2 +0.6 +0.4 -0.0 +0.2
stress Aluminum chloride 5 mM +0.2 +0.3 +0.7 -0.2 +0.4
stress limonene 5 vol% +0.4 +0.4 +0.0 +0.5 +0.2
stress LB Anaerobic with Spectinomycin 0.0000625 mM +0.2 +0.6 +0.3 +0.2 +0.2
phage Papa dilution 10-1 cacl2 maltose +0.7 +0.7 +0.6 +0.1 +0.1
remove
b4335
plot		 remove
b4336
plot		 remove
b4337		 remove
b4339
plot		 remove
b4340
plot