Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1193 experiments or choose conditions or try the comparative fitness browser

500 ntyjiK and yjiL are separated by 318 nucleotidesyjiL and yjiM are separated by 9 nucleotidesyjiM and yjiN are separated by 115 nucleotidesyjiN and yjiO are separated by 40 nucleotides b4333: yjiK - conserved protein (RefSeq), at 4,560,766 to 4,561,626 yjiK b4334: yjiL - putative enzyme (VIMSS), at 4,561,945 to 4,562,712 yjiL b4335: yjiM - orf, hypothetical protein (VIMSS), at 4,562,722 to 4,563,873 yjiM b4336: yjiN - conserved inner membrane protein (NCBI), at 4,563,989 to 4,565,269 yjiN b4337: yjiO - multidrug efflux system protein (NCBI), at 4,565,310 to 4,566,542 yjiO
Group Condition b4333 b4334 b4335 b4336 b4337
yjiK yjiL yjiM yjiN yjiO
phage Δdbn_10 +0.1 +0.6 -0.4 -1.2 -0.6
carbon source carbon source D-Glucose 0.25mM -0.6 -0.0 -0.2 +0.6 -1.2
carbon source Ying_Others16 rep A; time point 2 -0.0 -0.7 -0.5 +0.3 -0.4
stress LB Anaerobic with Furaltadone 0.000015625 mM +0.0 -0.0 +0.2 +0.3 -1.6
phage RB68 +0.1 +0.5 -0.3 -0.7 -0.7
stress undecene 5 vol% -0.2 -0.4 +0.0 +0.1 -0.8
phage T7_phage 0.0015625 MOI TC2 -0.1 -0.8 +0.0 +0.3 -0.5
stress Chlorite 1.25 mM +0.2 -0.3 -0.3 +0.2 -0.9
motility outer cut, LB soft agar motility assay -0.7 -0.4 +0.1 -0.6 +0.5
msc 3hr_MSC_rep2_lowinoculum -0.3 -0.5 -0.1 -0.3 +0.3
stress octanol 0.08 vol% +0.1 -0.3 +0.2 -0.5 -0.4
carbon source Ying_Others16 rep A; time point 1 -0.3 -0.4 +0.2 +0.2 -0.4
stress LB Anaerobic with Furaltadone 0.000015625 mM +0.0 +0.6 +0.0 +0.4 -1.5
stress limonene 1.25 vol% +0.0 -0.2 +0.2 +0.3 -0.8
phage T7_phage 0.00015625 MOI TC3 +0.0 -0.9 -0.0 +0.4 +0.2
stress Ciprofloxacin Hydrochloride 0.0003 mM -0.0 -0.0 -0.6 +0.7 -0.2
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM +0.2 -0.3 +0.1 -0.4 +0.4
phage R2_N4_T2_phage10 +0.3 +0.3 -0.3 +0.1 -0.4
stress limonene 2.5 vol% +0.2 -0.1 +0.0 +0.7 -0.7
stress limonene 2.5 vol% +0.2 -0.1 +0.2 +0.7 -0.6
phage Ste41 +0.1 +0.8 +0.3 -0.3 -0.4
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -0.3 +0.8 -0.6 +0.9 -0.1
nophagecontrol R1_N4_T1_phage0 +0.3 -0.4 -0.2 +0.4 +0.5
attachment_assay_attached_sample Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB +0.1 -0.2 +0.6 -0.1 +0.3
phage Phage_N4_cage_3_mouse_3_Cecum_40 hr +0.0 +0.5 +0.6 -0.3 -0.0
stress limonene 5 vol% +0.0 +0.2 +0.2 +0.8 -0.3
stress LB Anaerobic with Spectinomycin 0.0000625 mM -0.2 +0.1 +0.2 +0.6 +0.3
stress LB Anaerobic with Ticarcillin 0.00003125 mM -0.2 +0.1 +0.2 +0.6 +0.4
stress Aluminum chloride 5 mM +0.1 +0.4 +0.2 +0.3 +0.7
phage Papa dilution 10-1 cacl2 maltose +0.2 +0.7 +0.7 +0.7 +0.6
remove
b4333
plot
remove
b4334
plot
remove
b4335
remove
b4336
plot
remove
b4337
plot