Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1179 experiments or choose conditions or try the comparative fitness browser

500 ntfimD and fimF are separated by 9 nucleotidesfimF and fimG are separated by 12 nucleotidesfimG and fimH are separated by 19 nucleotidesfimH and gntP are separated by 242 nucleotides b4317: fimD - outer membrane usher protein, type 1 fimbrial synthesis (NCBI), at 4,543,119 to 4,545,755 fimD b4318: fimF - minor component of type 1 fimbriae (NCBI), at 4,545,765 to 4,546,295 fimF b4319: fimG - minor component of type 1 fimbriae (NCBI), at 4,546,308 to 4,546,811 fimG b4320: fimH - minor component of type 1 fimbriae (NCBI), at 4,546,831 to 4,547,733 fimH b4321: gntP - fructuronate transporter (NCBI), at 4,547,976 to 4,549,319 gntP
Group Condition b4317 b4318 b4319 b4320 b4321
fimD fimF fimG fimH gntP
phage Ste41 -1.5 N.D. -3.4 -2.2 +0.1
phage Ste41 -1.4 N.D. -2.0 -1.6 -0.3
lb LB -1.1 N.D. -1.2 -1.2 +0.0
lb LB -1.1 N.D. -1.0 -0.9 -0.1
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.8 N.D. -0.9 -1.2 +0.1
stress LB Anaerobic with Zinc Pyrithione 0.0000025 mM -0.8 N.D. -0.9 -0.8 +0.0
predation 3 hr rep1_Tiberius_100fold_dilution -0.9 N.D. -0.4 -1.1 -0.1
fr_1000_f3 Fr_1000_F3 -0.8 N.D. -0.7 -1.0 +0.1
predation 3 hr rep1_Tiberius_100fold_dilution -0.9 N.D. -0.4 -1.1 +0.1
lb LB -0.7 N.D. -0.7 -0.7 -0.2
nopredatorcontrol 3 hr NoPredatorControl -0.9 N.D. -0.5 -0.9 +0.1
lb LB, Anaerobic -0.6 N.D. -0.8 -0.6 +0.1
predation 3 hr rep1_HD100_no_dilution -0.7 N.D. -0.3 -0.8 -0.0
predation 3 hr rep1_Tiberius_10fold_dilution -0.7 N.D. -0.6 -0.7 +0.1
predation 3 hr rep1_Tiberius_no_dilution -0.5 N.D. -0.6 -0.6 +0.1
stress LB Anaerobic with Sulfamonomethoxine 0.00003125 mM -0.6 N.D. -0.5 -0.5 -0.0
predation 3 hr rep1_Tiberius_10fold_dilution -0.6 N.D. -0.6 -0.6 +0.1
predation 3 hr rep1_HD100_10fold_dilution -0.5 N.D. -0.7 -0.5 +0.1
stress LB Anaerobic with Norfloxacin 0.0000000390625 mM -0.7 N.D. -0.3 -0.6 +0.0
predation 3 hr rep1_HD100_100fold_dilution -0.6 N.D. -0.4 -0.6 +0.0
nopredatorcontrol 48 hr NoPredatorControl -0.5 N.D. -0.5 -0.5 +0.1
phage T7_phage 0.00015625 MOI TC4 +0.4 N.D. -0.2 +0.6 +0.4
msc 22hr_MSC_rep1_highinoculum -0.7 N.D. +2.0 +2.0 -0.0
msc 22hr_mediaonly_rep1_highinoculum -1.4 N.D. +2.5 +2.3 +0.1
msc 22hr_mediaonly_rep1_lowinoculum -1.3 N.D. +2.5 +2.3 -0.1
msc 22hr_MSC_rep2_lowinoculum -0.8 N.D. +2.3 +1.9 +0.1
msc 22hr_MSC_rep1_lowinoculum -0.7 N.D. +2.7 +2.2 +0.0
msc 22hr_MSC_rep2_highinoculum -1.1 N.D. +2.9 +2.4 +0.0
msc 22hr_mediaonly_rep2_highinoculum -1.4 N.D. +3.1 +2.7 +0.0
msc 22hr_mediaonly_rep2_lowinoculum -1.3 N.D. +3.2 +2.9 -0.1
remove
b4317
plot		 remove
b4318
plot		 remove
b4319		 remove
b4320
plot		 remove
b4321
plot