Fitness for 5 genes in Escherichia coli BW25113

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500 ntyjhY and yjhP are separated by 126 nucleotidesyjhP and yjhQ are separated by 55 nucleotidesyjhQ and yjhX are separated by 11 nucleotidesyjhX and yjhZ are separated by 376 nucleotides b4656: yjhY - no description, at 4,530,073 to 4,530,333 yjhY b4306: yjhP - KpLE2 phage-like element; predicted methyltransferase (NCBI), at 4,530,460 to 4,531,206 yjhP b4307: yjhQ - KpLE2 phage-like element; predicted acetyltransferase (NCBI), at 4,531,262 to 4,531,807 yjhQ b4566: yjhX - hypothetical protein (NCBI), at 4,531,819 to 4,532,076 yjhX b4657: yjhZ - no description, at 4,532,453 to 4,532,698 yjhZ
Group Condition b4656 b4306 b4307 b4566 b4657
yjhY yjhP yjhQ yjhX yjhZ
phage Lambda_ci1857 -1.0 -0.8 -0.4 +0.0 +0.1
phage Ste41 -0.1 -0.4 -0.9 -0.6 -0.0
phage HSDP4 -0.5 -0.4 -0.4 -0.3 -0.2
phage N4_phage 0.009375 MOI TC2 -0.5 -0.4 -0.4 -0.4 -0.0
phage Δdbn_10 +0.4 -0.8 -0.2 -0.8 -0.2
stress Ciprofloxacin Hydrochloride 0.0003 mM -0.5 +0.3 -0.1 -0.6 -0.6
carbon source L-Proline (C) -0.3 +0.2 +0.0 -1.2 -0.0
carbon source L-tyrosine (C) -1.3 -0.4 +0.4 -0.3 +0.3
mixed community control mixed community control -0.8 -0.5 +0.6 -0.3 -0.3
carbon source acetate (C) -0.8 -0.3 +0.2 -0.3 +0.1
stress Benzalkonium Chloride 0.004 mg/ml -1.3 -0.6 +0.7 +0.1 +0.1
phage T7_phage 0.00015625 MOI TC4 -0.6 +0.1 -0.2 -0.8 +0.6
carbon source propionate (C) -0.8 +0.2 +0.0 -0.6 +0.4
stress Cisplatin 0.1 mg/ml -0.5 +0.0 +0.6 -0.6 -0.1
carbon source Inosine (C) -0.3 +0.3 -0.8 +0.3 -0.0
phage T7_phage 0.0015625 MOI TC1 -0.7 +0.2 -0.1 -0.3 +0.5
carbon source carbon source D-Glucose 5mM +0.8 -0.3 -0.0 -0.7 +0.1
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +0.2 +0.7 +0.2 -0.7 -0.3
stress 3-methyl-1-butanol 1.25 vol% +0.8 -0.1 -0.7 -0.1 +0.2
phage PoolT9D29 +0.4 -0.4 +0.2 -0.3 +0.4
carbon source carbon source D-Mannose 5mM +0.5 -0.4 -0.1 +0.6 -0.0
motility inner cut, LB soft agar motility assay +0.4 -0.5 +0.4 +0.5 +0.0
no phage control CTR +0.5 -0.4 +0.6 +0.3 -0.2
phage PoolT9D30 +0.2 +0.4 +0.5 +0.3 -0.3
phage RB51m1 -0.1 +0.6 -0.2 +0.6 +0.3
no phage control CTR +0.7 +0.3 +0.0 +0.6 -0.1
msc 22hr_MSC_rep1_highinoculum +0.9 -0.1 +0.3 +0.6 +0.0
no phage control NophageCTRB12 +0.2 +0.5 +0.4 +0.8 -0.1
phage PoolT9D23 +0.8 -0.1 +0.4 +0.6 +0.2
no phage control NophageCTRA12 +0.5 +0.3 +0.5 +0.3 +0.5
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