Fitness for 5 genes in Escherichia coli BW25113

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500 ntthiE and thiC overlap by 1 nucleotidesthiC and rsd are separated by 232 nucleotidesrsd and nudC are separated by 94 nucleotidesnudC and hemE are separated by 39 nucleotides b3993: thiE - thiamine-phosphate pyrophosphorylase (NCBI), at 4,191,592 to 4,192,227 thiE b3994: thiC - thiamine biosynthesis protein ThiC (NCBI), at 4,192,227 to 4,194,122 thiC b3995: rsd - stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI), at 4,194,355 to 4,194,831 rsd b3996: nudC - NADH pyrophosphatase (NCBI), at 4,194,926 to 4,195,699 nudC b3997: hemE - uroporphyrinogen decarboxylase (NCBI), at 4,195,739 to 4,196,803 hemE
Group Condition b3993 b3994 b3995 b3996 b3997
thiE thiC rsd nudC hemE
carbon source Glycolic Acid (C) -4.4 -3.9 +0.8 -0.1 N.D.
carbon source D-Galacturonic Acid (C) MOPS -3.7 -3.7 +0.1 -0.2 N.D.
protonated/deuterated deuterated glucose in D2O -3.2 -3.2 -0.7 -0.2 N.D.
protonated/deuterated deuterated glucose in D2O -3.5 -3.0 -0.4 -0.1 N.D.
carbon source Glycolic Acid (C) -3.6 -3.9 +0.8 -0.2 N.D.
carbon source D-Galacturonic Acid (C) M9 -3.4 -3.2 +0.1 -0.0 N.D.
carbon source D-Glucuronic Acid (C) -3.2 -3.3 +0.0 -0.2 N.D.
carbon source D-Serine (C) -3.0 -2.9 -0.4 -0.1 N.D.
carbon source D-Glucose-6-Phosphate (C) -3.2 -2.7 +0.0 -0.1 N.D.
carbon source D-Glucuronic Acid (C) -3.1 -2.9 +0.0 -0.1 N.D.
protonated/deuterated deuterated glucose in D2O -2.5 -2.9 -0.4 -0.1 N.D.
nitrogen source D-Alanine (N) -3.0 -2.7 +0.1 -0.2 N.D.
carbon source D-Galacturonic Acid (C) -3.0 -2.8 +0.4 -0.4 N.D.
protonated/deuterated protonated glucose in D2O -3.2 -2.4 +0.0 -0.1 N.D.
carbon source a-Ketoglutaric (C) -3.4 -2.4 +0.4 -0.3 N.D.
carbon source D-Glucose-6-Phosphate (C) -2.7 -2.6 -0.1 -0.2 N.D.
carbon source D-Glucose (C) MOPS -2.5 -2.5 -0.3 -0.1 N.D.
protonated/deuterated protonated glucose in D2O -2.1 -2.4 -0.7 -0.0 N.D.
carbon source a-Ketoglutaric (C) -2.6 -2.1 -0.1 -0.3 N.D.
carbon source D-Galacturonic Acid (C) -2.3 -2.6 +0.3 -0.4 N.D.
protonated/deuterated protonated glucose in D2O -2.4 -2.2 -0.2 +0.0 N.D.
carbon source D-Serine (C) -2.5 -2.0 -0.1 -0.1 N.D.
carbon source acetate (C) -2.8 -1.7 +0.6 -0.7 N.D.
carbon source acetate (C) -2.4 -1.8 +0.8 -1.0 N.D.
carbon source D-Ribose (C) -2.2 -2.0 +0.4 -0.5 N.D.
carbon source D,L-Lactate (C) -2.0 -1.9 +0.5 -0.4 N.D.
carbon source L-Malic (C) -2.0 -2.1 +1.1 -0.5 N.D.
carbon source L-Malic (C) -2.3 -1.9 +1.4 -0.6 N.D.
carbon source succinate (C) -1.6 -1.8 +1.1 -0.7 N.D.
carbon source succinate (C) -1.6 -1.6 +1.1 -0.6 N.D.
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