Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1179 experiments or choose conditions or try the comparative fitness browser

500 ntyijD and trmA are separated by 39 nucleotidestrmA and btuB are separated by 368 nucleotidesbtuB and murI overlap by 56 nucleotidesmurI and rrsB are separated by 373 nucleotides b3964: yijD - conserved inner membrane protein (NCBI), at 4,159,794 to 4,160,153 yijD b3965: trmA - tRNA (uracil-5-)-methyltransferase (NCBI), at 4,160,193 to 4,161,293 trmA b3966: btuB - vitamin B12/cobalamin outer membrane transporter (NCBI), at 4,161,662 to 4,163,506 btuB b3967: murI - glutamate racemase, required for biosynthesis of D-glutamate and peptidoglycan (VIMSS), at 4,163,451 to 4,164,308 murI b3968: rrsB - 16S ribosomal RNA (NCBI), at 4,164,682 to 4,166,223 rrsB
Group Condition b3964 b3965 b3966 b3967 b3968
yijD trmA btuB murI rrsB
stress Benzalkonium Chloride 0.004 mg/ml -0.8 -0.9 -0.7 N.D. N.D.
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.1 -0.8 -1.0 N.D. N.D.
carbon source Ying_sugar7 rep C; time point 3 -0.2 -0.8 -0.8 N.D. N.D.
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.0 -0.7 -1.1 N.D. N.D.
motility outer cut, LB soft agar motility assay +0.0 -0.4 -1.4 N.D. N.D.
carbon source carbon source D-Glucose 0.25mM -0.1 -1.2 -0.4 N.D. N.D.
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.2 -0.7 -1.0 N.D. N.D.
motility outer cut, LB soft agar motility assay +0.0 -0.0 -1.5 N.D. N.D.
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.1 -0.7 -0.7 N.D. N.D.
carbon source Ying_sugar7 rep B; time point 3 -0.0 -0.6 -0.8 N.D. N.D.
carbon source carbon source D-Mannose 1mM -0.4 -0.4 -0.6 N.D. N.D.
carbon source Ying_Nucleobase14 rep A; time point 3 -0.2 -0.9 -0.3 N.D. N.D.
motility inner cut, LB soft agar motility assay -0.4 -0.5 -0.5 N.D. N.D.
carbon source Ying_sugar7 rep B; time point 2 -0.1 -0.7 -0.6 N.D. N.D.
carbon source D-Serine (C) +0.3 -0.3 -1.3 N.D. N.D.
carbon source D-Serine (C) +0.3 -0.2 -1.3 N.D. N.D.
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.1 -0.5 -0.7 N.D. N.D.
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.3 -0.7 -0.7 N.D. N.D.
carbon source Ying_Nucleobase14 rep B; time point 3 +0.2 -0.9 -0.3 N.D. N.D.
stress Trimethoprim 0.00125 mM -1.1 +0.5 -0.4 N.D. N.D.
stress Trimethoprim 0.0025 mM -1.0 +0.4 -0.4 N.D. N.D.
phage RB68 +0.3 -0.7 -0.5 N.D. N.D.
phage RB68 +0.4 -0.4 -0.6 N.D. N.D.
phage Ste41 +0.5 -0.5 -0.5 N.D. N.D.
stress LB Anaerobic with Cephalothin 0.0000078125 mM +0.8 -0.7 -0.4 N.D. N.D.
stress 2-Furfuraldehyde 0.25 vol% -0.0 +0.7 -0.9 N.D. N.D.
stress LB Aerobic with Ramoplanin 0.000125 mM -0.8 +0.5 +0.2 N.D. N.D.
stress Cephalothin 0.01 mg/ml +0.7 -0.6 -0.2 N.D. N.D.
stress LB Aerobic with Irgasan 0.0000003125 mM -0.2 +0.5 +0.7 N.D. N.D.
phage T7_phage 0.00015625 MOI TC4 +0.8 +0.6 +0.4 N.D. N.D.
remove
b3964
plot		 remove
b3965
plot		 remove
b3966		 remove
b3967
plot		 remove
b3968
plot