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Fitness for 5 genes in
Escherichia coli BW25113
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
yiiS and yiiT are separated by 26 nucleotides
yiiT and fpr are separated by 4 nucleotides
fpr and glpX are separated by 96 nucleotides
glpX and glpK are separated by 134 nucleotides
b3922: yiiS - hypothetical protein (NCBI), at 4,110,990 to 4,111,289
yiiS
b3923: yiiT - stress-induced protein (NCBI), at 4,111,316 to 4,111,744
yiiT
b3924: fpr - ferredoxin-NADP reductase (NCBI), at 4,111,749 to 4,112,495
fpr
b3925: glpX - fructose 1,6-bisphosphatase II (NCBI), at 4,112,592 to 4,113,602
glpX
b3926: glpK - glycerol kinase (NCBI), at 4,113,737 to 4,115,245
glpK
Group
Condition
b3922
b3923
b3924
b3925
b3926
yiiS
yiiT
fpr
glpX
glpK
carbon source
LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C)
+0.0
+0.1
-0.1
-0.4
-4.1
stress
M9 Aerobic Capecitabine 5000 uM
+0.1
-0.1
-2.0
+0.0
-2.0
carbon source
LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C)
+0.2
+0.1
+0.0
-0.4
-3.8
stress
M9 Aerobic Capecitabine 5000 uM
+0.0
+0.0
-2.0
-0.0
-1.9
carbon source
LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C)
+0.0
+0.1
-0.3
-0.3
-3.1
carbon source
LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C)
+0.1
+0.1
+0.0
-0.3
-3.3
carbon source
LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C)
+0.1
+0.2
-0.0
-0.3
-3.0
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 mM (C)
+0.0
+0.1
-0.1
+0.0
-3.1
carbon source
HMW_DNA_from_Pseudomonas_EB271-B4-1 46.9 ppm (C)
-0.0
+0.0
-0.3
-0.2
-2.5
carbon source
LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C)
+0.1
+0.2
+0.1
-0.2
-3.1
stress
M9 Anaerobic Capecitabine 5000 uM
-0.1
-0.0
-1.1
-0.0
-1.6
m9 aerobic no stress control
M9 aerobic no stress control
+0.0
+0.0
-1.8
+0.0
-0.9
no stress control
M9 no stress control; Dimethyl Sulfoxide 1 vol% 24 hr
+0.0
-0.0
-1.5
-0.0
-1.1
m9 aerobic no stress control
M9 aerobic no stress control
-0.0
-0.0
-1.7
+0.0
-0.9
stress
M9 Aerobic 5-Fluorodihydropyrimidine-2,4-dione 5000 uM
+0.0
-0.1
-1.6
+0.1
-1.0
stress
M9 Aerobic 5-Fluorodihydropyrimidine-2,4-dione 5000 uM
+0.0
-0.0
-1.4
+0.0
-1.1
carbon source
HMW_DNA_from_Lysinibacillus_FW301-JW8 40.7 mM (C)
+0.1
+0.2
+0.2
-0.3
-2.6
no stress control
M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
+0.0
-0.0
-1.3
+0.0
-1.2
stress
LB Aerobic with Phenazine ethosulfate 0.0000625 mM
+0.1
-0.0
-2.8
-0.1
+0.5
stress
M9 with Methotrexate 0.06 mM 48 hr
+0.1
-0.0
-1.7
+0.0
-0.7
stress
LB Aerobic with Phenazine ethosulfate 0.0000625 mM
+0.2
+0.1
-2.8
-0.2
+0.6
stress
M9 with Methotrexate 0.06 mM 24 hr
+0.1
-0.0
-1.6
+0.0
-0.6
no stress control
M9 no stress control; Dimethyl Sulfoxide 1 vol% 24 hr
+0.1
-0.0
-1.6
+0.0
-0.6
no stress control
M9 no stress control; Dimethyl Sulfoxide 1 vol% 48 hr
+0.2
+0.1
-1.7
+0.0
-0.6
carbon source
acetate (C)
+0.3
+0.0
-0.8
-0.1
-1.1
stress
2,4-Dinitrophenol 2 mM
+0.1
+0.1
+0.4
+0.1
-2.1
stress
LB Aerobic with Nitrofurantoin 0.00003125 mM
+0.0
-0.0
-1.4
+0.1
+0.7
stress
LB Anaerobic with Cephalothin 0.0000078125 mM
+0.2
+0.3
+0.4
-0.2
-1.2
carbon source
succinate (C)
+0.3
+0.1
-0.3
+0.2
+1.4
stress
Phosphomycin 0.001 mg/ml
+0.1
+0.2
-0.1
-0.1
+5.5
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