Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1193 experiments or choose conditions or try the comparative fitness browser

500 ntwzxE and rffT overlap by 4 nucleotidesrffT and wzyE overlap by 4 nucleotideswzyE and rffM are separated by 2 nucleotidesrffM and yifK are separated by 190 nucleotides b3792: wzxE - O-antigen translocase (NCBI), at 3,974,301 to 3,975,551 wzxE b4481: rffT - 4-alpha-L-fucosyltransferase (NCBI), at 3,975,548 to 3,976,627 rffT b3793: wzyE - putative enterobacterial common antigen polymerase (NCBI), at 3,976,624 to 3,977,976 wzyE b3794: rffM - putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI), at 3,977,979 to 3,978,719 rffM b3795: yifK - predicted transporter (NCBI), at 3,978,910 to 3,980,295 yifK
Group Condition b3792 b4481 b3793 b3794 b3795
wzxE rffT wzyE rffM yifK
micoeukaryotes Tetrahymena sp., Mixed culture-1 -4.8 -5.8 N.D. -4.5 +0.1
motility outer cut, LB soft agar motility assay -5.1 -3.6 N.D. -4.7 -0.2
mzaabcde mzaABCDE -2.1 -5.2 N.D. -5.5 -0.3
micoeukaryotes Acanthamoeba sp., muxed culture-2 -5.3 -4.8 N.D. -2.6 +0.1
micoeukaryotes Dictyostellum sp.mixed culture-1 -5.4 -4.1 N.D. -3.2 +0.2
micoeukaryotes Acanthamoeba sp., muxed culture-1 -5.3 -4.3 N.D. -3.0 +0.0
stress 2,4-Dinitrophenol 2 mM -4.6 -3.7 N.D. -3.8 +0.1
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -2.6 -3.7 N.D. -4.8 -0.3
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 -4.5 -3.8 N.D. -2.9 -0.0
micoeukaryotes Dictyostellum sp.mixed culture-2 -4.9 -4.1 N.D. -2.4 +0.1
carbon source Glycolic Acid (C) -4.4 -4.1 N.D. -2.6 -0.1
mzaabcde mzaABCDE -1.5 -5.3 N.D. -4.2 -0.1
mzaabcde mzaABCDE -1.6 -4.0 N.D. -5.3 -0.1
stress 2,4-Dinitrophenol 2 mM -3.8 -3.0 N.D. -4.0 -0.1
ppi ppI -2.0 -3.9 N.D. -4.4 -0.1
sir2-hera SIR2-HerA -2.0 -3.6 N.D. -4.8 -0.0
carbon source a-Ketoglutaric (C) -3.1 -3.1 N.D. -4.1 +0.1
carbon source a-Ketoglutaric (C) -3.4 -3.9 N.D. -2.9 -0.1
gfp_control GFP_control -2.1 -4.0 N.D. -4.3 +0.1
retron_ec_48_control retron_Ec_48_control -1.9 -4.9 N.D. -3.1 -0.2
drt_type_3 DRT_type_3 -1.9 -4.0 N.D. -4.1 -0.0
control Mixed culture control experiment -4.4 -3.1 N.D. -2.8 +0.1
carbon source Glycolic Acid (C) -4.1 -3.9 N.D. -2.0 +0.1
control Mixed culture control experiment -4.8 -2.9 N.D. -2.2 +0.1
sir2-hera SIR2-HerA -1.9 -3.8 N.D. -3.9 -0.0
sir2-hera SIR2-HerA -1.5 -4.2 N.D. -3.9 -0.1
carbon source Ying_sugar7 rep B; time point 3 -5.1 -2.9 N.D. -1.5 +0.1
control NoPredeControl -4.1 -3.4 N.D. -1.9 -0.0
carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) -3.8 -3.4 N.D. -2.0 +0.2
stress octanol 0.08 vol% +4.1 -3.6 N.D. -5.9 -0.1
remove
b3792
plot		 remove
b4481
plot		 remove
b3793		 remove
b3794
plot		 remove
b3795
plot