Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1179 experiments or choose conditions or try the comparative fitness browser

500 ntasnA and yieM are separated by 4 nucleotidesyieM and yieN overlap by 7 nucleotidesyieN and trkD are separated by 222 nucleotidestrkD and rbsD are separated by 166 nucleotides b3744: asnA - asparagine synthetase AsnA (NCBI), at 3,925,178 to 3,926,170 asnA b3745: yieM - predicted von Willibrand factor containing protein (NCBI), at 3,926,175 to 3,927,626 yieM b3746: yieN - putative 2-component regulator (VIMSS), at 3,927,620 to 3,929,116 yieN b3747: trkD - potassium transporter (NCBI), at 3,929,339 to 3,931,207 trkD b3748: rbsD - D-ribose pyranase [EC:5.4.99.62] (from data), at 3,931,374 to 3,931,793 rbsD
Group Condition b3744 b3745 b3746 b3747 b3748
asnA yieM yieN trkD rbsD
carbon source D-Ribose (C) -0.1 +0.1 -0.0 -0.0 -3.1
carbon source D-Ribose (C) +0.0 +0.1 -0.1 -0.1 -3.0
stress LB Anaerobic with Chloramphenicol 0.00000390625 mM +0.1 -1.4 -1.6 -0.0 +0.1
stress LB Anaerobic with Chloramphenicol 0.00000390625 mM +0.1 -1.2 -1.4 -0.1 -0.0
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM -0.0 -1.5 -1.2 +0.1 +0.1
stress sodium fluoride 100 mM -0.1 -1.3 -1.0 +0.1 +0.0
carbon source Glycolic Acid (C) +0.2 -0.9 -1.2 -0.3 -0.0
motility outer cut, LB soft agar motility assay +0.2 -0.5 -0.4 +0.2 -1.1
stress LB Aerobic with Irgasan 0.0000003125 mM +0.2 -0.7 -0.5 +0.6 +0.3
mzaabcde mzaABCDE -1.1 +0.4 +0.4 +0.1 +0.4
sir2-hera SIR2-HerA -1.1 +0.4 +0.2 +0.2 +0.5
retron_ec_48_control retron_Ec_48_control -1.0 +0.4 +0.4 +0.2 +0.4
retron_ec_48_control retron_Ec_48_control -1.2 +0.4 +0.3 +0.2 +0.5
drt_type_3 DRT_type_3 -0.9 +0.4 +0.4 +0.1 +0.6
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.4 +0.6 +0.6 -0.3 -0.5
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.3 +0.7 +0.8 -0.3 -0.3
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.2 +0.8 +0.7 -0.1 -0.6
stress M9 Anaerobic 5-Fluorodihydropyrimidine-2,4-dione 5000 uM -0.1 +1.0 +0.9 -0.1 +0.1
stress LB Anaerobic with Hygromycin B 0.00025 mM +0.1 +1.0 +0.9 +0.0 -0.1
stress LB Anaerobic with Hygromycin B 0.00025 mM +0.0 +1.1 +1.1 -0.1 +0.1
m9 anaerobic no stress control M9 anaerobic no stress control +0.1 +1.1 +1.1 -0.0 +0.1
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM +0.4 +1.0 +0.8 +0.2 +0.1
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.3 +1.2 +1.2 -0.2 -0.0
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM +0.2 +1.1 +1.0 -0.0 +0.3
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.1 +1.5 +1.3 -0.1 +0.0
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.0 +1.4 +1.3 -0.1 +0.2
stress Ciprofloxacin Hydrochloride 0.0003 mM +0.7 +0.7 +0.6 +0.6 +0.2
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM +0.4 +1.5 +1.4 -0.3 +0.1
stress Ciprofloxacin Hydrochloride 0.000156 mM +0.8 +0.6 +0.5 +0.6 +0.6
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +0.4 +1.5 +1.6 +0.5 +0.1
remove
b3744
plot
remove
b3745
plot
remove
b3746
remove
b3747
plot
remove
b3748
plot