Fitness for 5 genes in Escherichia coli BW25113

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500 ntuhpC and uhpB are separated by 9 nucleotidesuhpB and uhpA overlap by 1 nucleotidesuhpA and ilvN are separated by 75 nucleotidesilvN and ilvB are separated by 3 nucleotides b3667: uhpC - regulator of uhpT (VIMSS), at 3,845,328 to 3,846,647 uhpC b3668: uhpB - sensor histidine protein kinase phosphorylates UhpA (VIMSS), at 3,846,657 to 3,848,159 uhpB b3669: uhpA - DNA-binding response regulator in two-component regulatory system wtih UhpB (NCBI), at 3,848,159 to 3,848,749 uhpA b3670: ilvN - acetolactate synthase small subunit (NCBI), at 3,848,825 to 3,849,115 ilvN b3671: ilvB - acetolactate synthase large subunit (NCBI), at 3,849,119 to 3,850,807 ilvB
Group Condition b3667 b3668 b3669 b3670 b3671
uhpC uhpB uhpA ilvN ilvB
carbon source D-Glucose-6-Phosphate (C) -0.9 -0.8 -1.2 -1.5 -4.0
carbon source D-Glucose-6-Phosphate (C) -1.2 -0.9 -0.8 -1.4 -3.5
carbon source D-Xylose (C) -0.2 -0.1 +0.1 -2.8 -4.2
carbon source D-Maltose (C) -0.1 -0.0 -0.1 -2.5 -4.0
carbon source D-Maltose (C) +0.0 -0.0 -0.0 -2.0 -4.6
carbon source D-Xylose (C) +0.0 +0.0 +0.2 -2.2 -3.8
nutrient M9 Glucose 0.2%, Thauer's vit mix -0.0 -0.1 -0.1 -1.8 -3.7
nutrient M9 Glucose 0.2%, Thauer's vit mix -0.1 -0.1 -0.0 -1.8 -3.7
carbon source Glycolic Acid (C) -0.0 -0.1 +0.3 -2.5 -3.5
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin -0.0 -0.1 -0.0 -1.8 -3.8
sulfur source M63 no sulfur + 5 mM sulfate -0.0 -0.0 -0.0 -2.3 -3.3
nutrient M9 Glucose 0.2%, Thauer's vit mix -0.1 -0.0 -0.1 -1.8 -3.7
nitrogen source Putrescine (N) -0.0 -0.0 +0.1 -2.4 -3.2
carbon source D-Glucosamine Hydrochloride (C) -0.1 -0.1 +0.0 -1.0 -4.4
carbon source Glycolic Acid (C) +0.0 +0.1 +0.0 -3.0 -2.7
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin -0.1 -0.1 -0.1 -1.6 -3.7
sulfur source M63 no sulfur + 5 mM sulfate +0.1 -0.1 -0.1 -2.1 -3.3
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin with Avidin -0.0 -0.0 -0.0 -1.8 -3.6
carbon source D-Ribose (C) -0.1 -0.0 +0.1 -1.7 -3.5
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin with Avidin -0.0 -0.0 -0.1 -1.5 -3.7
nitrogen source L-Glutamine (N) -0.0 -0.0 -0.2 -1.8 -3.1
carbon source D-Trehalose (C) -0.1 +0.1 +0.1 -1.4 -3.9
nitrogen source Ammonium chloride (N) -0.2 -0.0 -0.1 -1.5 -3.4
nitrogen source Putrescine (N) -0.1 +0.0 -0.0 -1.7 -3.3
nutrient M9 Glucose 0.2%, Thauer's vit mix without biotin -0.0 -0.0 -0.1 -1.4 -3.6
nitrogen source L-Glutamine (N) -0.1 -0.0 -0.2 -1.6 -3.2
carbon source D-Sorbitol (C) +0.0 +0.1 -0.0 -1.4 -3.6
sulfur source M63 no sulfur + 5 mM L-cys +0.1 -0.1 +0.1 -1.9 -3.2
nitrogen source Cytidine (N) +0.1 +0.1 +0.0 -2.4 -2.6
carbon source D-Ribose (C) -0.1 +0.2 +0.3 -1.1 -3.8
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