Fitness for 5 genes in Escherichia coli BW25113

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500 ntgltS and yicE are separated by 279 nucleotidesyicE and yicH are separated by 120 nucleotidesyicH and yicI are separated by 52 nucleotidesyicI and yicJ are separated by 9 nucleotides b3653: gltS - glutamate transporter (NCBI), at 3,825,483 to 3,826,688 gltS b3654: yicE - predicted transporter (NCBI), at 3,826,968 to 3,828,359 yicE b3655: yicH - hypothetical protein (NCBI), at 3,828,480 to 3,830,189 yicH b3656: yicI - predicted alpha-glucosidase (NCBI), at 3,830,242 to 3,832,560 yicI b3657: yicJ - putative permease (VIMSS), at 3,832,570 to 3,833,952 yicJ
Group Condition b3653 b3654 b3655 b3656 b3657
gltS yicE yicH yicI yicJ
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.4 -0.4 -2.0 -0.3 +0.1
phage T7_phage 0.0015625 MOI TC2 -0.4 -0.5 -0.0 -0.3 -0.8
stress octanol 0.08 vol% -0.6 -0.1 -0.1 -0.3 -0.6
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.2 -0.0 -1.1 -0.4 -0.0
phage Ste41 -0.3 -0.1 -0.2 -0.5 -0.3
stress LB Anaerobic with Amoxicillin 0.0000078125 mM -0.5 -0.1 -0.6 -0.0 -0.2
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -0.0 -0.9 -0.6 +0.3 -0.1
stress LB Anaerobic with Amoxicillin 0.0000078125 mM -0.2 -0.2 -0.8 -0.0 -0.1
control PBS_cage_1_mouse_2_Cecum_40 hr -0.3 -0.2 +0.0 -0.3 -0.4
predation 6 hr rep2_HD100_10fold_dilution_grewON -0.5 -0.4 -0.2 -0.3 +0.4
predation 6 hr rep1_HD100_10fold_dilution_grewON -0.7 -0.3 -0.2 +0.3 -0.0
stress LB Anaerobic with Ampicillin 0.00000195313 mM -0.2 -0.1 -0.2 -0.4 +0.4
phage Lambda_ci1857 -0.6 +0.2 -0.1 -0.2 +0.2
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.8 +0.6 +0.1 -0.0 -0.3
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.4 +0.2 -0.4 +0.2 +0.0
stress Bacitracin 1 mg/ml +0.6 -0.5 +0.1 -0.3 +0.1
stress Cisplatin 0.1 mg/ml +0.5 -0.4 -0.1 -0.1 +0.1
carbon source carbon source D-Glucose 0.25mM -0.5 +0.2 +0.4 -0.0 +0.1
phage T7_phage 0.00015625 MOI TC4 +0.3 -0.1 +0.1 +0.4 -0.5
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM +0.7 -0.3 -0.1 +0.1 -0.1
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM -0.4 -0.2 +0.4 +0.1 +0.4
plasmid transformation vcDART vector transformation; liquid outgrowth assay +0.3 +0.4 +0.1 -0.3 +0.1
stress Benzalkonium Chloride 0.004 mg/ml +0.8 -0.4 +0.2 +0.1 +0.1
carbon source carbon source D-Mannose 1mM +0.2 -0.1 +0.8 +0.0 +0.2
carbon source carbon source D-Glucose 20mM +0.0 +0.4 +1.4 +0.0 -0.2
carbon source carbon source D-Glucose 20mM +0.0 +0.3 +1.4 -0.2 +0.1
carbon source carbon source D-Mannose 5mM +0.4 -0.2 +1.5 +0.1 +0.0
carbon source carbon source D-Mannose 20mM -0.3 +0.1 +2.2 -0.0 +0.0
carbon source carbon source D-Mannose 5mM +0.2 +0.2 +1.5 +0.3 +0.0
carbon source carbon source D-Mannose 20mM +0.1 +0.1 +2.0 +0.2 +0.1
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