Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b4647	b3557	b3558	b4614	b3559
		mokA	insJ	insK	sokA	glyS
mzaabcde	mzaABCDE	-2.6	-0.4	-0.3	-0.9	N.D.
carbon source	Casamino-acids	-3.6	-0.3	+0.1	-0.2	N.D.
nophagecontrol	No phage control	-3.6	+0.1	-0.0	-0.4	N.D.
motility	outer cut, LB soft agar motility assay	-2.9	-0.2	+0.1	-0.8	N.D.
nophagecontrol	No phage control	-3.6	-0.0	-0.1	-0.0	N.D.
ppi	ppI	-2.9	-0.2	-0.1	-0.3	N.D.
attachment_assay_attached_sample	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	-0.8	-0.3	+0.2	-2.7	N.D.
dart	Outgrowth from conjugation with pRH22 in LB+Gent50	-2.4	-0.2	+0.1	-1.0	N.D.
phage	Utah_phage 15 MOI	-3.6	+0.1	-0.0	+0.1	N.D.
carbon source	Casamino-acids	-3.4	-0.1	+0.0	+0.2	N.D.
drt_type_3	DRT_type_3	-2.8	+0.0	-0.1	-0.3	N.D.
carbon source	carbon source D-Mannose 5mM	-1.0	-0.1	-0.1	-2.1	N.D.
mixed community	Mixed culture; Bdellovibrio bacteriovorus HD100 1:1 starting OD to Ecoli; 0.02X nutrient broth; outgrowth in LBwithKan	-2.9	+0.0	-0.0	-0.3	N.D.
gfp_control	GFP_control	-2.8	+0.0	-0.1	-0.3	N.D.
stress	RCH2_defined_1percent_glucose with Chloride 100 mM and Betaine 100 uM	-3.1	-0.0	+0.0	+0.0	N.D.
mixed community	Mixed culture; Bdellovibrio bacteriovorus str. Tiberius 1:1 starting OD to Ecoli; 0.02X nutrient broth; outgrowth in LBwithKan	-2.8	-0.2	+0.1	-0.0	N.D.
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-2.2	+0.2	+0.1	-1.0	N.D.
phage	Chi_phage 15 MOI	-3.6	+0.3	+0.1	+0.3	N.D.
stress	LB Aerobic with Ramoplanin 0.000125 mM	+0.4	-0.4	-0.0	-2.3	N.D.
control	PBS_cage_1_mice _Feces_16 hr	+0.8	-0.2	-0.0	-2.5	N.D.
phage	Mnm4	-2.2	-0.4	+0.1	+0.5	N.D.
msc	3hr_mediaonly_rep2_lowinoculum	-2.8	+0.5	-0.0	+0.6	N.D.
msc	22hr_mediaonly_rep1_highinoculum	-2.6	+0.1	+0.1	+0.6	N.D.
phage	Mnm6	-2.4	-0.1	+0.0	+0.7	N.D.
msc	3hr_MSC_rep1_lowinoculum	-2.7	+0.0	+0.0	+1.0	N.D.
predation	6 hr rep2_HD100_10fold_dilution_grewON	+1.2	+0.1	-0.1	-2.9	N.D.
carbon source	carbon source D-Glucose 5mM	+2.6	-0.1	-0.3	-1.1	N.D.
phage	Phage_N4_cage_3_mouse_3_Cecum_40 hr	+2.6	-0.4	-0.0	-0.2	N.D.
phage	Phage_N4_cage_3_mouse_4_Cecum_40 hr	+2.7	+0.2	+0.1	-0.5	N.D.
phage	T7_phage 0.00015625 MOI TC4	+2.3	+0.3	+0.6	+0.2	N.D.