Fitness for 5 genes in Escherichia coli BW25113

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500 ntyhhL and yhhM are separated by 2 nucleotidesyhhM and yhhN are separated by 140 nucleotidesyhhN and zntA are separated by 73 nucleotideszntA and yhhP are separated by 101 nucleotides b3466: yhhL - conserved inner membrane protein (NCBI), at 3,603,002 to 3,603,271 yhhL b3467: yhhM - hypothetical protein (NCBI), at 3,603,274 to 3,603,633 yhhM b3468: yhhN - conserved inner membrane protein (NCBI), at 3,603,774 to 3,604,400 yhhN b3469: zntA - zinc, cobalt and lead efflux system (NCBI), at 3,604,474 to 3,606,672 zntA b3470: yhhP - cell developmental protein SirA (NCBI), at 3,606,774 to 3,607,019 yhhP
Group Condition b3466 b3467 b3468 b3469 b3470
yhhL yhhM yhhN zntA yhhP
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM -1.2 -1.2 -2.9 -2.3 N.D.
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM -0.7 -1.1 -2.8 -1.8 N.D.
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM -0.7 -0.8 -2.6 -2.1 N.D.
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM -0.9 -0.8 -2.3 -1.4 N.D.
plasmid transformation mariner vector transformation; liquid outgrowth assay -5.6 -0.0 +0.4 +0.1 N.D.
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.4 +0.3 -0.2 -4.2 N.D.
plasmid transformation mariner vector transformation; liquid outgrowth assay -4.5 -0.2 +0.7 -0.1 N.D.
carbon source Glycolic Acid (C) +0.4 +0.1 -0.2 -4.0 N.D.
carbon source acetate (C) -0.6 +0.1 -0.0 -3.0 N.D.
stress LB Anaerobic with Zinc Pyrithione 0.0000025 mM -0.2 -0.3 -0.7 -2.4 N.D.
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -2.3 -0.1 +0.4 -1.4 N.D.
carbon source acetate (C) -0.5 +0.2 -0.0 -3.0 N.D.
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -1.5 -0.6 +0.3 -1.4 N.D.
carbon source Glycolic Acid (C) +0.3 +0.2 -0.2 -3.6 N.D.
nitrogen source Cytidine (N) -0.1 -0.2 -0.1 -2.8 N.D.
nitrogen source Cytidine (N) -0.4 -0.2 -0.1 -2.5 N.D.
plasmid transformation vcDART vector transformation; liquid outgrowth assay -3.2 -0.2 +0.3 -0.0 N.D.
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM -1.1 -0.1 -0.2 -1.7 N.D.
nitrogen source Putrescine (N) -0.5 +0.2 +0.1 -2.7 N.D.
phage Ste41 -1.4 -0.7 -0.2 -0.6 N.D.
stress LB Anaerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM -0.2 -0.2 -0.4 -2.1 N.D.
plasmid transformation mariner vector transformation; liquid outgrowth assay -4.3 +0.1 +0.5 +0.8 N.D.
carbon source Acetate (C) -0.9 +0.1 -0.1 -2.0 N.D.
carbon source Acetate (C) -0.6 -0.2 +0.1 -2.0 N.D.
plasmid transformation vcDART vector transformation; liquid outgrowth assay -3.6 +0.2 +0.5 +0.1 N.D.
nitrogen source Putrescine (N) -0.1 +0.1 +0.1 -2.7 N.D.
plasmid transformation vcDART vector transformation; liquid outgrowth assay -2.4 -0.2 -0.1 +0.4 N.D.
carbon source D-Galacturonic Acid (C) -0.6 +0.0 +0.4 -1.9 N.D.
stress M9 Aerobic 5-Fluorodihydropyrimidine-2,4-dione 5000 uM -0.5 +0.2 +0.3 -2.0 N.D.
carbon source L-Malic (C) +0.9 +0.2 -0.1 -1.7 N.D.
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