Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1179 experiments or choose conditions or try the comparative fitness browser

500 ntglgC and glgX are separated by 17 nucleotidesglgX and glgB overlap by 4 nucleotidesglgB and asd are separated by 272 nucleotidesasd and yhgN are separated by 192 nucleotides b3430: glgC - glucose-1-phosphate adenylyltransferase (NCBI), at 3,566,056 to 3,567,351 glgC b3431: glgX - glycogen debranching enzyme (NCBI), at 3,567,369 to 3,569,342 glgX b3432: glgB - glycogen branching enzyme (NCBI), at 3,569,339 to 3,571,525 glgB b3433: asd - aspartate-semialdehyde dehydrogenase (NCBI), at 3,571,798 to 3,572,901 asd b3434: yhgN - predicted antibiotic transporter (NCBI), at 3,573,094 to 3,573,687 yhgN
Group Condition b3430 b3431 b3432 b3433 b3434
glgC glgX glgB asd yhgN
nitrogen source Putrescine (N) -0.3 +0.1 -1.6 N.D. +0.0
nitrogen source Putrescine (N) -0.2 +0.3 -2.0 N.D. +0.1
nitrogen source D-Alanine (N) -0.4 -0.3 -0.8 N.D. -0.2
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -0.1 -0.3 -1.1 N.D. -0.2
phage T7_phage 0.00015625 MOI TC4 -0.8 +0.0 -0.3 N.D. -0.5
phage Lambda_ci1857 -0.2 -0.7 -0.6 N.D. +0.0
motility outer cut, LB soft agar motility assay -0.2 -0.1 -0.4 N.D. -0.6
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.3 +0.0 -1.1 N.D. -0.4
carbon source Glycolic Acid (C) +0.2 -0.1 -1.2 N.D. +0.1
control PBS_cage_1_mice _Feces_16 hr -0.0 +0.1 -0.6 N.D. -0.4
carbon source D-Serine (C) +0.1 +0.1 -1.0 N.D. -0.0
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.4 -0.5 +0.3 N.D. -0.0
stress octanol 0.08 vol% -0.3 +0.3 -0.6 N.D. -0.1
stress 1-ethyl-3-methylimidazolium chloride 80 mM -0.3 -0.2 +0.3 N.D. -0.5
carbon source D-Serine (C) -0.1 +0.2 -0.9 N.D. +0.1
carbon source Glycolic Acid (C) +0.2 -0.3 -0.9 N.D. +0.3
stress LB Anaerobic with Cephalothin 0.0000078125 mM -0.1 -0.4 +0.3 N.D. -0.4
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.5 -0.3 +0.1 N.D. +0.3
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.6 -0.1 +0.2 N.D. +0.3
carbon source carbon source D-Glucose 20mM -0.3 +0.5 -0.4 N.D. +0.2
nitrogen source L-Arginine (N) +0.3 -0.2 -0.3 N.D. +0.3
carbon source D-Glucosamine Hydrochloride (C) +0.4 -0.3 +0.3 N.D. -0.2
carbon source carbon source D-Mannose 0.5mM +0.4 +0.2 +0.3 N.D. -0.6
stress Benzalkonium Chloride 0.004 mg/ml +0.0 +1.4 -0.7 N.D. -0.3
carbon source D-Glucosamine Hydrochloride (C) +0.6 -0.1 +0.4 N.D. -0.5
stress 3-methyl-1-butanol 1.25 vol% +0.0 +0.3 -0.3 N.D. +0.6
phage Phage_N4_cage_3_mouse_4_Cecum_40 hr +0.3 +0.2 +0.0 N.D. +0.5
carbon source LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C) +0.6 +0.3 +0.3 N.D. -0.1
carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) +0.8 +0.5 +0.6 N.D. -0.0
carbon source LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C) +0.9 +0.5 +0.6 N.D. -0.1
remove
b3430
plot		 remove
b3431
plot		 remove
b3432		 remove
b3433
plot		 remove
b3434
plot