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Fitness for 5 genes in
Escherichia coli BW25113
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
greB and yhgF are separated by 96 nucleotides
yhgF and feoA are separated by 456 nucleotides
feoA and feoB are separated by 16 nucleotides
feoB and yhgG overlap by 1 nucleotides
b3406: greB - transcription elongation factor GreB (NCBI), at 3,534,834 to 3,535,310
greB
b3407: yhgF - orf, hypothetical protein (VIMSS), at 3,535,407 to 3,537,728
yhgF
b3408: feoA - ferrous iron transport protein A (NCBI), at 3,538,185 to 3,538,412
feoA
b3409: feoB - ferrous iron transport protein B (NCBI), at 3,538,429 to 3,540,750
feoB
b3410: yhgG - predicted DNA-binding transcriptional regulator (NCBI), at 3,540,750 to 3,540,986
yhgG
Group
Condition
b3406
b3407
b3408
b3409
b3410
greB
yhgF
feoA
feoB
yhgG
stress
LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM
-0.4
-0.1
-2.4
-2.6
-0.6
stress
LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM
-0.5
-0.2
-2.0
-2.3
-0.3
stress
LB Anaerobic with 2-Mercaptopyridine N-oxide 0.000015625 mM
+0.1
+0.0
-1.8
-1.9
-0.9
stress
LB Anaerobic with Furaltadone 0.000015625 mM
-0.3
+0.2
-1.9
-1.8
-0.7
stress
LB Anaerobic with 2-Mercaptopyridine N-oxide 0.000015625 mM
-0.0
+0.0
-1.7
-1.9
-0.9
stress
LB Anaerobic with Zinc Pyrithione 0.0000025 mM
+0.5
-0.1
-2.0
-2.1
-0.6
stress
Aluminum chloride 5 mM
-0.7
-0.5
-0.9
-1.3
-0.8
stress
LB Anaerobic with Nitrofurantoin 0.000015625 mM
-0.1
+0.2
-1.8
-1.8
-0.6
stress
LB Anaerobic with Furaltadone 0.000015625 mM
-0.5
+0.2
-1.4
-1.3
-0.5
stress
Chlorite 1.25 mM
-0.1
-1.3
-0.9
-0.8
-0.4
stress
LB Aerobic with Zinc Pyrithione 0.0000025 mM
-0.0
+0.2
-1.2
-1.3
-1.1
stress
LB Anaerobic with Nitrofurantoin 0.00003125 mM
-0.4
+0.3
-1.1
-1.8
-0.4
stress
LB Anaerobic with 8-hydroxy-nitroquinoline 0.00000125 mM
+0.1
+0.0
-1.4
-1.2
-0.8
stress
LB Anaerobic with 8-hydroxy-nitroquinoline 0.0000025 mM
+0.2
+0.1
-1.0
-1.1
-1.4
stress
LB Anaerobic with 8-hydroxy-nitroquinoline 0.00000125 mM
+0.2
+0.1
-1.3
-1.4
-0.7
phage
Laval1374
-0.1
-0.1
-1.2
-1.2
-0.5
stress
LB Anaerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM
-0.1
+0.1
-1.3
-1.4
-0.3
stress
LB Anaerobic with Benzethonium chloride 0.00003125 mM
-0.3
+0.2
-1.3
-1.3
-0.2
stress
LB Anaerobic with Zinc Pyrithione 0.0000025 mM
+0.3
+0.0
-1.5
-1.5
-0.2
stress
LB Anaerobic with Nitrofurantoin 0.000015625 mM
-0.1
+0.1
-1.3
-1.2
-0.4
stress
limonene 5 vol%
+0.1
+0.0
-0.9
-1.1
-0.9
stress
LB Anaerobic with 8-hydroxy-nitroquinoline 0.0000025 mM
+0.1
+0.0
-0.8
-1.1
-0.9
stress
LB Anaerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM
+0.2
+0.1
-1.5
-1.5
-0.0
stress
LB Anaerobic with Irgasan 0.000000625 mM
+0.4
-0.1
-1.0
-0.9
-0.5
stress
LB Anaerobic with Ampicillin 0.00000195313 mM
-0.4
-0.0
+1.1
+1.3
+0.4
phage
TP4
-0.4
+0.1
+1.6
+1.3
+0.6
phage
TP4
-0.4
+0.0
+1.3
+1.4
+0.9
phage
Ste41
+0.6
+0.3
+0.6
+1.1
+1.4
stress
LB Aerobic with Phenazine ethosulfate 0.0000625 mM
-0.3
-0.1
+2.0
+2.2
+1.9
stress
LB Aerobic with Phenazine ethosulfate 0.0000625 mM
-0.0
+0.1
+2.1
+2.3
+2.4
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