Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1179 experiments or choose conditions or try the comparative fitness browser

500 ntmscL and yhdL overlap by 4 nucleotidesyhdL and zntR are separated by 55 nucleotideszntR and yhdN are separated by 10 nucleotidesyhdN and rplQ are separated by 106 nucleotides b3291: mscL - large-conductance mechanosensitive channel (NCBI), at 3,436,046 to 3,436,456 mscL b4550: yhdL - hypothetical protein (NCBI), at 3,436,453 to 3,436,671 yhdL b3292: zntR - zinc-responsive transcriptional regulator (NCBI), at 3,436,727 to 3,437,152 zntR b3293: yhdN - hypothetical protein (NCBI), at 3,437,163 to 3,437,531 yhdN b3294: rplQ - 50S ribosomal protein L17 (NCBI), at 3,437,638 to 3,438,021 rplQ
Group Condition b3291 b4550 b3292 b3293 b3294
mscL yhdL zntR yhdN rplQ
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.2 -0.2 -2.3 -0.2 N.D.
retron_ec_48_control retron_Ec_48_control -1.3 -0.6 -0.2 -0.8 N.D.
gfp_control GFP_control -1.3 -0.2 -0.3 -0.9 N.D.
gfp_control GFP_control -1.1 -0.1 -0.6 -0.8 N.D.
gfp_control GFP_control -1.2 -0.7 +0.0 -0.6 N.D.
carbon source acetate (C) -0.1 +0.1 -2.3 +0.1 N.D.
carbon source acetate (C) +0.1 +0.2 -3.1 +0.4 N.D.
stress LB Anaerobic with Zinc Pyrithione 0.00000125 mM -0.1 +0.1 -2.4 +0.1 N.D.
stress LB Anaerobic with Zinc Pyrithione 0.0000025 mM -0.2 +0.4 -2.8 +0.3 N.D.
stress LB Aerobic with Zinc Pyrithione 0.00000125 mM +0.2 +0.1 -2.4 +0.2 N.D.
nitrogen source Putrescine (N) -0.0 +0.1 -2.3 +0.3 N.D.
stress LB Anaerobic with Zinc Pyrithione 0.00000125 mM -0.0 +0.1 -2.3 +0.4 N.D.
stress LB Aerobic with Doxycycline hyclate 0.00000625 mM +0.3 -2.1 -0.2 +0.3 N.D.
stress LB Anaerobic with Chloramphenicol 0.00000390625 mM +0.1 -1.8 -0.6 +0.6 N.D.
stress LB Aerobic with Zinc Pyrithione 0.00000125 mM +0.2 +0.5 -2.5 +0.2 N.D.
stress LB Anaerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM +0.0 +0.2 -2.0 +0.3 N.D.
stress LB Anaerobic with Zinc Pyrithione 0.0000025 mM -0.1 +0.6 -2.0 +0.1 N.D.
carbon source carbon source D-Glucose 0.25mM +0.2 -1.3 -0.9 +0.6 N.D.
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.5 -1.0 -0.9 +1.1 N.D.
stress 2-nitrobenzenesulfonyl fluoride -0.0 -0.1 -1.8 +0.7 N.D.
nitrogen source Putrescine (N) +0.0 +0.4 -2.1 +0.4 N.D.
carbon source a-Ketoglutaric (C) +0.2 +0.3 -1.8 +0.5 N.D.
carbon source Glycolic Acid (C) +0.0 +0.3 -1.7 +0.6 N.D.
carbon source L-Malic (C) +0.1 +0.3 -1.8 +0.7 N.D.
carbon source a-Ketoglutaric (C) +0.0 +0.3 -1.7 +0.7 N.D.
carbon source Glycolic Acid (C) +0.2 +0.3 -1.8 +0.8 N.D.
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM +0.1 +2.1 -2.4 +1.0 N.D.
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM -0.3 +2.0 -2.1 +1.6 N.D.
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM -0.0 +2.4 -2.0 +1.9 N.D.
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM +0.8 +1.9 -1.5 +1.5 N.D.
remove
b3291
plot		 remove
b4550
plot		 remove
b3292		 remove
b3293
plot		 remove
b3294
plot