Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli BW25113
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 1179 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
yghJ and yghK are separated by 484 nucleotides
yghK and glcB are separated by 354 nucleotides
glcB and glcG are separated by 21 nucleotides
glcG and glcF are separated by 4 nucleotides
b4466: yghJ - predicted inner membrane lipoprotein (NCBI), at 3,112,572 to 3,117,134
yghJ
b2975: yghK - glycolate transporter (NCBI), at 3,117,619 to 3,119,301
yghK
b2976: glcB - malate synthase (NCBI), at 3,119,656 to 3,121,827
glcB
b2977: glcG - hypothetical protein (NCBI), at 3,121,849 to 3,122,253
glcG
b4467: glcF - glycolate oxidase iron-sulfur subunit (NCBI), at 3,122,258 to 3,123,481
glcF
Group
Condition
b4466
b2975
b2976
b2977
b4467
yghJ
yghK
glcB
glcG
glcF
phage
T7_phage 0.00015625 MOI TC3
-0.5
-0.1
-0.1
-1.3
-0.2
phage
Ste41
-0.1
-0.3
-0.1
-0.5
-0.9
phage
T7_phage 0.0015625 MOI TC2
-0.2
-0.1
+0.2
-1.2
-0.6
stress
Chlorite 1.25 mM
-0.1
-0.2
+0.2
-1.0
-0.5
stress
LB Anaerobic with Phenazine ethosulfate 0.000125 mM
+0.2
+0.0
+0.1
-0.9
-0.6
stress
Benzalkonium Chloride 0.004 mg/ml
-0.0
+0.3
-0.4
-0.8
-0.3
phage
Δdbn_10
-0.2
+0.1
-0.1
-0.7
-0.3
stress
Cephalothin 0.01 mg/ml
+0.1
-0.0
+0.1
-0.7
-0.5
stress
Chlorite 0.4 mM
-0.1
-0.1
+0.2
-0.6
-0.2
phage
T7_phage 0.00015625 MOI TC4
-0.2
-0.4
-0.2
+0.3
-0.1
phage
N4_phage 0.00009375 MOI TC4
+0.1
+0.3
+0.2
-0.6
-0.1
nophagecontrol
R1_N4_T1_phage0
-0.0
-0.2
+0.2
-0.5
+0.4
stress
toluene 2.5 vol%
+0.0
-0.1
-0.1
+0.7
-0.6
carbon source
carbon source D-Glucose 0.25mM
-0.1
+0.0
-0.1
+0.7
-0.4
stress
methylglyoxal 0.008 vol%
+0.0
+0.2
-0.2
+0.6
-0.3
stress
Aluminum chloride 5 mM
-0.1
-0.0
-0.4
+0.6
+0.2
control
PBS_cage_1_mice _Feces_22 hr
-0.1
+0.1
+0.8
+0.3
-0.4
stress
copper (II) chloride 2 mM
+0.1
+0.1
-0.2
+0.7
+0.1
control
PBS_cage_1_mice _Feces_40 hr
-0.1
+0.1
+0.6
+0.4
-0.2
carbon source
Glycolic Acid (C)
+0.1
-0.6
+2.1
+2.4
-3.1
plasmid transformation
mariner vector transformation; liquid outgrowth assay
+0.1
-0.4
+0.4
+0.2
+0.7
plasmid transformation
mariner vector transformation; liquid outgrowth assay
+0.0
-0.2
+0.4
+0.7
+0.3
carbon source
Glycolic Acid (C)
+0.1
-0.5
+2.5
+2.6
-3.6
motility
outer cut, LB soft agar motility assay
+0.1
+0.2
-0.1
+0.7
+0.2
control
PBS_cage_1_mice _Feces_16 hr
+0.0
+0.0
+0.8
+0.4
-0.1
carbon source
carbon source D-Mannose 1mM
-0.0
+0.2
-0.1
+0.6
+0.5
stress
Bacitracin 1 mg/ml
+0.0
+0.2
+0.1
+1.1
+0.1
plasmid transformation
vcDART vector transformation; liquid outgrowth assay
+0.4
-0.2
+0.4
+1.0
+0.0
stress
LB Anaerobic with Benzethonium chloride 0.00003125 mM
-0.0
-0.1
+0.0
+1.6
+0.1
phage
Papa dilution 10-1 cacl2 maltose
-0.1
+0.1
+0.3
+0.8
+0.7
remove
b4466
plot
remove
b2975
plot
remove
b2976
remove
b2977
plot
remove
b4467
plot