Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b2935	b2936	b2937	b2938	b2939
		tktA	yggG	speB	speA	yqgB
phage	Phage_N4_cage_3_mouse_3_Cecum_40 hr	-3.9	-0.4	-0.4	-0.7	-4.6
stress	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM	-0.7	-0.4	-4.0	-1.4	-2.5
stress	Spectinomycin 0.0125 mg/ml	-1.6	-0.4	-1.3	-3.8	-2.0
control	PBS_cage_1_mouse_2_Cecum_40 hr	-3.1	+0.0	-0.6	-0.3	-4.7
stress	2-Furfuraldehyde 0.25 vol%	-1.4	-0.3	-2.3	-3.1	-1.4
carbon source	Ying_all64 rep C; time point 3	-3.7	-0.0	-2.2	-0.9	-1.4
stress	LB Aerobic with Ramoplanin 0.000125 mM	-0.9	-0.4	-2.5	-1.5	-2.7
stress	Spectinomycin 0.00625 mg/ml	-2.0	-0.2	-1.0	-3.4	-0.8
predation	6 hr rep1_HD100_10fold_dilution_grewON	-1.9	+0.1	-0.8	-1.1	-3.7
control	PBS_cage_1_mice _Feces_16 hr	-1.3	-0.0	-1.1	-0.6	-4.3
motility	inner cut, LB soft agar motility assay	-3.7	-0.0	-1.2	-0.1	-2.0
stress	Bacitracin 1 mg/ml	-1.0	-0.3	-3.3	-1.6	-0.6
phage	Phage_N4_cage_3_mice _Feces_40 hr	-3.9	+0.3	-0.9	-0.5	-1.6
control	PBS_cage_1_mice _Feces_22 hr	-1.6	+0.0	-1.2	-0.7	-3.0
stress	2-Furfuraldehyde 0.125 vol%	-1.5	-0.1	-2.4	-2.7	+0.2
control	PBS_cage_1_mice _Feces_40 hr	-2.1	-0.2	-1.0	-0.7	-2.3
stress	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM	-0.4	+0.1	-3.7	-1.4	-0.8
carbon source	carbon source D-Glucose 0.25mM	-1.1	-0.6	-0.0	+0.1	-4.2
carbon source	carbon source D-Mannose 5mM	-1.8	+0.6	-1.0	+0.3	-3.9
phage	Phage_N4_cage_3_mouse_4_Cecum_40 hr	-2.9	+0.5	-0.8	-0.7	-1.7
motility	outer cut, LB soft agar motility assay	-3.9	-0.6	-1.1	-0.3	+0.4
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-1.9	+1.1	-3.0	-1.2	-0.4
stress	2,4-Dinitrophenol 2 mM	-3.5	-0.0	-2.2	+0.6	-0.2
stress	decyl alcohol 5 vol%	-4.1	+0.2	-1.4	+0.3	-0.2
stress	2,4-Dinitrophenol 2 mM	-3.5	-0.0	-1.9	+0.6	+0.5
control	PBS_cage_2_mouse_1_Cecum_40 hr	-3.8	-0.4	-0.8	-0.2	+1.0
motility	outer cut, LB soft agar motility assay	-2.3	+0.1	-2.1	+0.3	+1.4
carbon source	L-Malic (C)	-2.8	-0.1	-1.5	+1.0	+0.9
stress	LB Aerobic with Irgasan 0.0000003125 mM	+0.9	-1.1	-2.2	+1.6	+1.6
stress	Benzalkonium Chloride 0.004 mg/ml	-1.4	+0.3	+4.3	+4.6	+3.7