Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b2834	b2835	b2836	b4444	b4445
		tas	ygeD	aas	rygA	omrB
phage	T7_phage 0.0015625 MOI TC2	-0.3	+0.5	+0.1	-1.3	-2.2
carbon source	carbon source D-Glucose 0.25mM	-0.1	-0.1	-0.4	-1.2	-1.3
predation	6 hr rep1_HD100_10fold_dilution_grewON	-0.1	-0.2	-0.0	-0.3	-1.8
biofilm_assay_planktonic_sample	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Biofilm_growth_time=7hrs; Biofilm_growth_media=LB; Sample_type=planktonic; Outgrowth=None	-0.0	-1.2	-1.1	+0.0	-0.1
attachment_assay_attached_sample	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	-0.1	-1.2	-1.2	+0.1	+0.0
control	PBS_cage_1_mouse_1_Cecum_40 hr	-0.2	-0.2	-0.0	-0.9	-0.7
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	+0.1	-0.2	-0.1	-1.0	-0.8
phage	Bas60	+0.2	-0.3	-0.6	-0.1	-1.1
attachment_assay_attached_sample	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	+0.3	-1.3	-1.2	+0.6	-0.1
motility	outer cut, LB soft agar motility assay	+0.5	-0.1	+0.1	-1.0	-1.0
carbon source	carbon source D-Mannose 5mM	-0.5	+0.2	+0.4	-0.5	-0.7
phage	Ste41	-0.5	+0.1	-0.0	+0.7	-1.2
stress	LB Anaerobic with Cephalothin 0.0000078125 mM	+0.0	-0.0	+0.3	+0.3	-1.3
control	PBS_cage_1_mice _Feces_22 hr	-0.1	+0.2	+0.6	-0.8	-0.6
phage	T7_phage 0.00015625 MOI TC4	+0.0	+0.4	-0.4	+0.5	-1.0
phage	Δdbn_10	+0.1	-0.1	-0.4	-0.6	+1.1
stress	LB Anaerobic with Nitrofurantoin 0.00003125 mM	+0.6	-0.7	+0.1	-0.0	+0.7
stress	Chloramphenicol 0.001 mg/ml	+0.2	+0.2	+0.3	+1.0	-0.4
phage	Phage_N4_cage_3_mouse_4_Cecum_40 hr	+0.2	+0.3	+0.5	-0.3	+0.9
stress	Benzalkonium Chloride 0.004 mg/ml	-0.4	+0.7	+0.6	+0.3	+0.7
stress	LB Anaerobic with Irgasan 0.000000625 mM	+0.1	+0.9	+1.0	-0.1	+0.3
stress	LB Anaerobic with Irgasan 0.000000625 mM	+0.3	+0.7	+1.2	-0.0	+0.3
phage	Papa dilution 10-1 cacl2 maltose	+0.5	+0.1	-0.1	+1.1	+0.8
stress	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM	+0.3	+1.0	+1.1	+0.1	+0.1
stress	LB Aerobic with Ramoplanin 0.000125 mM	+0.0	+1.4	+1.2	+0.6	-0.4
phage	Ste41	+0.4	+0.7	-0.1	+1.5	+0.2
stress	LB Aerobic with Ramoplanin 0.000125 mM	+0.0	+1.3	+1.3	-0.3	+0.4
stress	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM	+0.4	+1.2	+1.2	+0.2	-0.0
stress	LB Anaerobic with Benzethonium chloride 0.00003125 mM	+0.3	+0.5	+1.2	+0.6	+0.5
stress	LB Aerobic with Irgasan 0.0000003125 mM	+0.5	+5.3	+6.1	-1.0	-0.5