Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1179 experiments or choose conditions or try the comparative fitness browser

500 ntsdaB and ygdG are separated by 111 nucleotidesygdG and fucO are separated by 54 nucleotidesfucO and fucA are separated by 27 nucleotidesfucA and fucP are separated by 546 nucleotides b2797: sdaB - L-serine deaminase II (NCBI), at 2,927,598 to 2,928,965 sdaB b2798: ygdG - Ssb-binding protein, misidentified as ExoIX (RefSeq), at 2,929,077 to 2,929,832 ygdG b2799: fucO - L-1,2-propanediol oxidoreductase (NCBI), at 2,929,887 to 2,931,035 fucO b2800: fucA - L-fuculose phosphate aldolase (NCBI), at 2,931,063 to 2,931,710 fucA b2801: fucP - L-fucose transporter (NCBI), at 2,932,257 to 2,933,573 fucP
Group Condition b2797 b2798 b2799 b2800 b2801
sdaB ygdG fucO fucA fucP
carbon source L-Fucose (C) +0.3 -0.3 -1.9 -4.1 -1.3
carbon source L-Fucose (C) +0.2 -0.0 -1.9 -4.1 -1.0
control PBS_cage_2_mouse_1_Cecum_40 hr -0.6 -0.8 -0.1 -1.2 +0.1
stress LB Aerobic with Ramoplanin 0.000125 mM -0.4 -0.7 +0.1 -0.5 -0.6
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -1.0 -0.9 -0.1 -0.1 -0.0
control PBS_cage_2_mice _Feces_40 hr -0.3 -0.5 +0.3 -1.3 -0.1
phage Phage_N4_cage_4_mice _Feces_40 hr -0.1 -0.5 +0.1 -1.5 +0.1
phage Lambda_ci1857 -1.5 -0.4 +0.1 +0.1 -0.2
control PBS_cage_2_mouse_2_Cecum_40 hr -0.3 -0.4 -0.2 -0.8 +0.0
plasmid transformation vcDART vector transformation; liquid outgrowth assay -0.1 -0.0 +0.1 -1.0 -0.6
control PBS_cage_2_mice _Feces_22 hr -0.4 -0.5 +0.1 -0.8 -0.1
phage Phage_N4_cage_3_mouse_1_Cecum_40 hr -0.5 +0.3 -0.1 -1.2 +0.1
phage T7_phage 0.0015625 MOI TC2 +0.0 -0.4 -0.9 +0.3 -0.2
stress Aluminum chloride 5 mM -1.0 +0.6 +0.0 -0.3 -0.2
predation 6 hr rep2_HD100_10fold_dilution_grewON -0.1 -0.6 -0.4 +0.5 -0.2
control PBS_cage_1_mice _Feces_40 hr -0.0 +0.6 +0.4 -1.7 -0.0
stress Cisplatin 0.1 mg/ml -0.9 +0.5 +0.3 -0.1 -0.4
stress LB Anaerobic with Cephalothin 0.0000078125 mM -1.1 +0.3 +0.2 -0.3 +0.1
control PBS_cage_1_mouse_2_Cecum_40 hr -0.1 +0.3 +0.4 -0.9 -0.3
gfp_control GFP_control +0.8 -0.4 -0.4 -0.3 +0.0
drt_type_3 DRT_type_3 +0.8 -0.4 -0.1 -0.5 +0.1
mzaabcde mzaABCDE +0.9 -0.3 -0.3 -0.3 +0.2
sir2-hera SIR2-HerA +1.0 -0.3 -0.2 -0.4 -0.0
sir2-hera SIR2-HerA +0.9 -0.4 -0.2 -0.3 +0.2
phage Ste41 +0.3 +0.3 +0.4 +0.2 -0.7
mzaabcde mzaABCDE +0.9 -0.1 -0.4 -0.3 +0.2
phage Ste41 +0.7 +0.6 -0.5 -0.0 -0.2
control PBS_cage_1_mice _Feces_22 hr +0.2 +0.9 +0.4 -1.0 +0.0
control PBS_cage_1_mice _Feces_16 hr +0.2 +0.9 +0.6 -1.1 +0.1
phage TP4 +0.3 +0.3 +0.3 -0.5 +0.5
remove
b2797
plot
remove
b2798
plot
remove
b2799
remove
b2800
plot
remove
b2801
plot