Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b2539	b2540	b2541	b2542	b2543
		hcaF	hcaC	hcaB	hcaD	yphA
stress	LB Anaerobic with Nitrofurantoin 0.00003125 mM	-0.8	-0.2	+0.1	-1.2	-0.2
msc	22hr_MSC_rep1_highinoculum	+0.0	-1.7	-0.3	+0.3	-0.2
carbon source	acetate (C)	+0.0	-1.5	-0.2	+0.0	-0.2
stress	LB Anaerobic with Cephalothin 0.0000078125 mM	+0.2	-0.5	-0.1	-0.6	-0.8
stress	octanol 0.08 vol%	-0.3	-0.6	-0.9	+0.1	-0.2
stress	3-methyl-1-butanol 1.25 vol%	-0.6	-0.0	-1.0	+0.1	-0.2
attachment_assay_attached_sample	Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	-1.5	+0.6	-0.3	-0.4	-0.1
phage	N4_phage 0.09375 MOI TC1	+0.1	-0.8	-0.9	-0.0	-0.1
motility	outer cut, LB soft agar motility assay	-0.8	-0.9	+0.1	+0.2	-0.2
phage	Δdbn_10	+0.6	-0.5	-0.3	-0.5	-0.6
motility	outer cut, LB soft agar motility assay	+0.2	-1.6	+0.5	+0.1	-0.4
phage	T7_phage 0.0015625 MOI TC2	-0.2	-0.9	+0.5	-0.4	+0.3
carbon source	carbon source D-Mannose 0.5mM	+0.7	-0.3	+0.1	+0.1	-1.2
plasmid transformation	mariner vector transformation; liquid outgrowth assay	+0.0	-1.2	+0.1	+0.7	-0.2
stress	Benzalkonium Chloride 0.004 mg/ml	+0.7	-0.4	+0.2	-0.4	-0.6
stress	Tetracycline 0.0004 mg/ml	+0.5	+0.2	-0.6	-0.5	+0.2
carbon source	carbon source D-Glucose 0.25mM	+0.5	-0.6	-0.7	+0.3	+0.4
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	+1.9	+0.0	-0.1	-0.2	-1.5
plasmid transformation	mariner vector transformation; liquid outgrowth assay	+0.4	-0.4	+0.6	+0.1	-0.5
motility	inner cut, LB soft agar motility assay	+0.7	-0.4	-0.0	+0.5	-0.3
stress	Bacitracin 1 mg/ml	-0.2	+0.7	+0.6	-0.4	-0.2
motility	inner cut, LB soft agar motility assay	+0.5	+0.4	+0.5	-0.5	-0.4
carbon source	carbon source D-Glucose 0.25mM	+0.8	-0.2	-0.3	-0.1	+0.8
control	PBS_cage_1_mice _Feces_16 hr	-0.2	+0.6	-0.2	+0.6	+0.3
carbon source	carbon source D-Mannose 20mM	+0.6	-0.5	+0.5	-0.1	+0.5
phage	T7_phage 0.0015625 MOI TC1	+0.0	+1.3	-0.0	-0.2	+0.4
phage	Ste41	+0.8	+0.5	+0.5	-0.1	-0.2
plasmid transformation	mariner vector transformation; liquid outgrowth assay	+0.1	+0.8	+0.0	+1.1	-0.1
stress	LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM	+2.3	+0.3	-0.4	+0.0	-0.1
carbon source	carbon source D-Glucose 20mM	+0.6	+1.0	+0.3	+0.1	+0.2