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Fitness for 5 genes in
Escherichia coli BW25113
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500 nt
glpQ and glpT are separated by 4 nucleotides
glpT and glpA are separated by 272 nucleotides
glpA and glpB overlap by 11 nucleotides
glpB and glpC overlap by 4 nucleotides
b2239: glpQ - periplasmic glycerophosphodiester phosphodiesterase (NCBI), at 2,347,957 to 2,349,033
glpQ
b2240: glpT - sn-glycerol-3-phosphate transporter (NCBI), at 2,349,038 to 2,350,396
glpT
b2241: glpA - sn-glycerol-3-phosphate dehydrogenase (anaerobic), large subunit, FAD/NAD(P)-binding (NCBI), at 2,350,669 to 2,352,297
glpA
b2242: glpB - anaerobic glycerol-3-phosphate dehydrogenase subunit B (NCBI), at 2,352,287 to 2,353,546
glpB
b2243: glpC - sn-glycerol-3-phosphate dehydrogenase (anaerobic), small subunit (NCBI), at 2,353,543 to 2,354,733
glpC
Group
Condition
b2239
b2240
b2241
b2242
b2243
glpQ
glpT
glpA
glpB
glpC
stress
LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM
-0.0
+0.7
-2.0
-2.1
-2.1
stress
LB Anaerobic with Irgasan 0.000000625 mM
-0.0
+0.6
-1.3
-2.0
-1.6
stress
LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM
+0.4
+0.6
-1.7
-2.0
-1.6
stress
LB Anaerobic with Irgasan 0.000000625 mM
-0.1
+0.8
-1.6
-1.3
-1.7
stress
LB Anaerobic with Nitrofurantoin 0.000015625 mM
-0.1
+0.4
-1.4
-0.7
-1.6
stress
LB Anaerobic with Spiramycin 0.000125 mM
-0.1
+0.6
-1.3
-1.3
-1.2
stress
LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM
-0.5
-0.0
-1.0
-0.6
-0.5
stress
LB Anaerobic with Spiramycin 0.000125 mM
+0.1
+0.6
-1.2
-0.8
-1.1
stress
LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM
-0.2
+0.1
-0.9
-0.4
-0.8
stress
LB Anaerobic with Nitrofurantoin 0.000015625 mM
+0.0
+0.4
-0.7
-0.6
-1.0
stress
2,4-Dinitrophenol 2 mM
-0.9
-0.9
+0.1
+0.1
-0.1
stress
LB Anaerobic with Spiramycin 0.00003125 mM
+0.1
+0.4
-0.8
-0.6
-0.7
stress
LB Anaerobic with Benzethonium chloride 0.000015625 mM
-0.3
+0.4
-0.5
-0.5
-0.4
motility
outer cut, LB soft agar motility assay
+0.3
+0.3
-1.4
+0.3
-0.8
stress
LB Anaerobic with Furaltadone 0.000015625 mM
+0.0
+0.5
-0.5
-0.6
-0.7
stress
LB Anaerobic with Doxycycline hyclate 0.000000390625 mM
+0.1
+0.5
-0.7
-0.7
-0.4
stress
LB Anaerobic with Spiramycin 0.00003125 mM
+0.2
+0.4
-0.7
-0.4
-0.5
stress
LB Anaerobic with Chloramphenicol 0.00000390625 mM
+0.1
+0.7
-0.5
-0.4
-0.4
carbon source
Glycolic Acid (C)
+0.2
+0.7
-0.5
-0.4
-0.5
carbon source
Glycolic Acid (C)
+0.3
+0.8
-0.5
-0.5
-0.3
stress
LB Anaerobic with Cephalothin 0.0000078125 mM
-0.4
-1.0
+0.6
+0.6
+0.2
stress
LB Anaerobic with Cephalothin 0.0000078125 mM
-0.3
-1.0
+0.5
+0.4
+0.6
stress
LB Anaerobic with Amoxicillin 0.0000078125 mM
-0.2
-0.3
+0.6
+0.8
+0.5
phage
Ste41
+0.1
-0.3
+0.2
+0.4
+1.0
stress
LB Anaerobic with Amoxicillin 0.0000078125 mM
-0.2
-0.2
+0.8
+0.8
+0.6
carbon source
succinate (C)
+0.2
+0.9
+0.4
+0.2
+0.3
carbon source
succinate (C)
+0.4
+0.9
+0.4
+0.6
+0.1
carbon source
L-Malic (C)
+0.2
+0.9
+0.5
+0.3
+0.5
carbon source
L-Malic (C)
+0.2
+0.9
+0.6
+0.5
+0.4
stress
Phosphomycin 0.001 mg/ml
+0.2
+11.3
+0.0
-0.1
-0.1
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