Fitness for 5 genes in Escherichia coli BW25113

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500 ntb2174 and spr are separated by 411 nucleotidesspr and rtn are separated by 180 nucleotidesrtn and yejA are separated by 81 nucleotidesyejA and yejB are separated by 0 nucleotides b2174: b2174 - orf, hypothetical protein (VIMSS), at 2,266,876 to 2,267,589 b2174 b2175: spr - predicted peptidase, outer membrane lipoprotein (NCBI), at 2,268,001 to 2,268,567 spr b2176: rtn - hypothetical protein (NCBI), at 2,268,748 to 2,270,304 rtn b2177: yejA - orf, hypothetical protein (VIMSS), at 2,270,386 to 2,272,200 yejA b2178: yejB - predicted oligopeptide transporter subunit (NCBI), at 2,272,201 to 2,273,295 yejB
Group Condition b2174 b2175 b2176 b2177 b2178
b2174 spr rtn yejA yejB
stress LB Aerobic with Ramoplanin 0.000125 mM -1.8 -4.9 -0.5 -0.2 +0.3
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -4.3 -3.6 +0.1 +0.4 +0.6
stress Trimethoprim 0.00125 mM -0.9 -5.2 -0.1 +0.3 +0.2
motility outer cut, LB soft agar motility assay -0.4 -4.4 +0.0 -0.2 -0.6
stress LB Aerobic with Ramoplanin 0.000125 mM -1.7 -3.8 -0.2 +0.1 +0.1
stress LB Aerobic with Irgasan 0.0000003125 mM -1.6 -3.1 -0.0 -0.2 -0.2
stress LB Aerobic with Trimethoprim 0.00000125 mM -0.6 -4.4 -0.1 -0.1 +0.0
stress LB Anaerobic with Ramoplanin 0.0000625 mM -0.1 -5.0 -0.0 +0.1 -0.0
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.3 -4.7 +0.1 -0.0 +0.2
stress 2,4-Dinitrophenol 2 mM -2.4 -1.1 +0.1 -0.6 -0.7
stress LB Anaerobic with Mecillinam 0.00003125 mM -0.3 -4.2 -0.1 -0.0 +0.2
stress 2,4-Dinitrophenol 2 mM -2.2 -0.7 +0.2 -0.7 -0.9
stress Nalidixic 0.0313 mM -3.4 -1.2 +0.0 +0.2 +0.1
stress LB Anaerobic with Mecillinam 0.0000078125 mM -0.3 -4.0 +0.0 +0.0 +0.1
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM +0.3 -4.4 +0.1 -0.2 +0.0
stress Trimethoprim 0.0025 mM -1.2 -2.9 -0.2 +0.3 +0.2
stress LB Anaerobic with Cephalothin 0.0000078125 mM -2.6 -1.7 -0.1 +0.2 +0.6
stress octanol 0.08 vol% -4.9 +2.4 -0.1 +0.0 -0.8
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -1.3 -2.5 +0.1 +0.2 +0.4
stress Bacitracin 1 mg/ml -1.7 -2.3 +0.4 +0.2 +0.5
stress Benzalkonium Chloride 0.004 mg/ml -3.9 +1.2 +0.3 -0.2 -0.2
stress Nalidixic 0.006 mg/ml -3.3 +1.6 -0.0 +0.1 -0.0
stress Aluminum chloride 5 mM +1.8 -3.3 +0.5 +0.2 +0.0
stress Chloramphenicol 0.001 mg/ml -1.7 +2.8 +0.3 +0.1 +0.1
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM -1.6 +4.4 +0.1 -0.1 -0.0
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM -0.7 +3.2 +0.1 +0.3 +0.4
stress Chloramphenicol 0.0025 mg/ml -1.2 +4.4 +0.2 +0.1 -0.0
stress Tetracycline 0.0008 mg/ml -0.7 +4.1 +0.2 +0.1 -0.1
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM -0.8 +3.7 +0.3 +0.5 +0.3
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM -0.9 +5.1 +0.1 +0.0 +0.2
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