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Protein
Homologs
Fitness for 5 genes in
Escherichia coli BW25113
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500 nt
b2174 and spr are separated by 411 nucleotides
spr and rtn are separated by 180 nucleotides
rtn and yejA are separated by 81 nucleotides
yejA and yejB are separated by 0 nucleotides
b2174: b2174 - orf, hypothetical protein (VIMSS), at 2,266,876 to 2,267,589
b2174
b2175: spr - predicted peptidase, outer membrane lipoprotein (NCBI), at 2,268,001 to 2,268,567
spr
b2176: rtn - hypothetical protein (NCBI), at 2,268,748 to 2,270,304
rtn
b2177: yejA - orf, hypothetical protein (VIMSS), at 2,270,386 to 2,272,200
yejA
b2178: yejB - predicted oligopeptide transporter subunit (NCBI), at 2,272,201 to 2,273,295
yejB
Group
Condition
b2174
b2175
b2176
b2177
b2178
b2174
spr
rtn
yejA
yejB
stress
LB Aerobic with Ramoplanin 0.000125 mM
-1.8
-4.9
-0.5
-0.2
+0.3
stress
LB Anaerobic with Benzethonium chloride 0.00003125 mM
-4.3
-3.6
+0.1
+0.4
+0.6
stress
Trimethoprim 0.00125 mM
-0.9
-5.2
-0.1
+0.3
+0.2
motility
outer cut, LB soft agar motility assay
-0.4
-4.4
+0.0
-0.2
-0.6
stress
LB Aerobic with Ramoplanin 0.000125 mM
-1.7
-3.8
-0.2
+0.1
+0.1
stress
LB Aerobic with Irgasan 0.0000003125 mM
-1.6
-3.1
-0.0
-0.2
-0.2
stress
LB Aerobic with Trimethoprim 0.00000125 mM
-0.6
-4.4
-0.1
-0.1
+0.0
stress
LB Anaerobic with Ramoplanin 0.0000625 mM
-0.1
-5.0
-0.0
+0.1
-0.0
plasmid transformation
mariner vector transformation; liquid outgrowth assay
-0.3
-4.7
+0.1
-0.0
+0.2
stress
2,4-Dinitrophenol 2 mM
-2.4
-1.1
+0.1
-0.6
-0.7
stress
LB Anaerobic with Mecillinam 0.00003125 mM
-0.3
-4.2
-0.1
-0.0
+0.2
stress
2,4-Dinitrophenol 2 mM
-2.2
-0.7
+0.2
-0.7
-0.9
stress
Nalidixic 0.0313 mM
-3.4
-1.2
+0.0
+0.2
+0.1
stress
LB Anaerobic with Mecillinam 0.0000078125 mM
-0.3
-4.0
+0.0
+0.0
+0.1
stress
LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM
+0.3
-4.4
+0.1
-0.2
+0.0
stress
Trimethoprim 0.0025 mM
-1.2
-2.9
-0.2
+0.3
+0.2
stress
LB Anaerobic with Cephalothin 0.0000078125 mM
-2.6
-1.7
-0.1
+0.2
+0.6
stress
octanol 0.08 vol%
-4.9
+2.4
-0.1
+0.0
-0.8
stress
LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM
-1.3
-2.5
+0.1
+0.2
+0.4
stress
Bacitracin 1 mg/ml
-1.7
-2.3
+0.4
+0.2
+0.5
stress
Benzalkonium Chloride 0.004 mg/ml
-3.9
+1.2
+0.3
-0.2
-0.2
stress
Nalidixic 0.006 mg/ml
-3.3
+1.6
-0.0
+0.1
-0.0
stress
Aluminum chloride 5 mM
+1.8
-3.3
+0.5
+0.2
+0.0
stress
Chloramphenicol 0.001 mg/ml
-1.7
+2.8
+0.3
+0.1
+0.1
stress
LB Aerobic with Phenazine ethosulfate 0.0000625 mM
-1.6
+4.4
+0.1
-0.1
-0.0
stress
LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM
-0.7
+3.2
+0.1
+0.3
+0.4
stress
Chloramphenicol 0.0025 mg/ml
-1.2
+4.4
+0.2
+0.1
-0.0
stress
Tetracycline 0.0008 mg/ml
-0.7
+4.1
+0.2
+0.1
-0.1
stress
LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM
-0.8
+3.7
+0.3
+0.5
+0.3
stress
LB Aerobic with Phenazine ethosulfate 0.0000625 mM
-0.9
+5.1
+0.1
+0.0
+0.2
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