Fitness for 5 genes in Escherichia coli BW25113

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500 ntyeiQ and yeiR are separated by 117 nucleotidesyeiR and b2174 are separated by 38 nucleotidesb2174 and spr are separated by 411 nucleotidesspr and rtn are separated by 180 nucleotides b2172: yeiQ - predicted dehydrogenase, NAD-dependent (NCBI), at 2,264,267 to 2,265,733 yeiQ b2173: yeiR - predicted enzyme (NCBI), at 2,265,851 to 2,266,837 yeiR b2174: b2174 - orf, hypothetical protein (VIMSS), at 2,266,876 to 2,267,589 b2174 b2175: spr - predicted peptidase, outer membrane lipoprotein (NCBI), at 2,268,001 to 2,268,567 spr b2176: rtn - hypothetical protein (NCBI), at 2,268,748 to 2,270,304 rtn
Group Condition b2172 b2173 b2174 b2175 b2176
yeiQ yeiR b2174 spr rtn
stress LB Aerobic with Ramoplanin 0.000125 mM +0.0 +0.2 -1.8 -4.9 -0.5
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM +0.0 +1.0 -4.3 -3.6 +0.1
stress Trimethoprim 0.00125 mM -0.0 +0.0 -0.9 -5.2 -0.1
stress LB Aerobic with Ramoplanin 0.000125 mM -0.1 -0.0 -1.7 -3.8 -0.2
stress LB Anaerobic with Ramoplanin 0.0000625 mM -0.1 -0.0 -0.1 -5.0 -0.0
stress LB Aerobic with Trimethoprim 0.00000125 mM +0.2 -0.0 -0.6 -4.4 -0.1
stress LB Anaerobic with Mecillinam 0.00003125 mM +0.0 -0.1 -0.3 -4.2 -0.1
motility outer cut, LB soft agar motility assay +0.1 +0.2 -0.4 -4.4 +0.0
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.2 +0.4 -0.3 -4.7 +0.1
stress Nalidixic 0.0313 mM +0.1 +0.2 -3.4 -1.2 +0.0
stress LB Aerobic with Irgasan 0.0000003125 mM +0.2 +0.3 -1.6 -3.1 -0.0
stress Trimethoprim 0.0025 mM -0.1 +0.3 -1.2 -2.9 -0.2
stress LB Anaerobic with Cephalothin 0.0000078125 mM +0.3 +0.1 -2.6 -1.7 -0.1
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM -0.1 -0.1 +0.3 -4.4 +0.1
stress LB Aerobic with Trimethoprim 0.00000125 mM -0.0 +0.3 -0.5 -3.5 -0.0
stress LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM +0.2 -0.4 +0.6 -3.5 +0.0
stress 2-Furfuraldehyde 0.25 vol% +0.2 +0.5 -0.6 -3.0 +0.2
stress Bacitracin 1 mg/ml +0.1 +1.2 -1.7 -2.3 +0.4
stress octanol 0.08 vol% +0.1 +0.5 -4.9 +2.4 -0.1
stress Aluminum chloride 5 mM -0.5 -0.2 +1.8 -3.3 +0.5
stress LB Aerobic with Doxycycline hyclate 0.00000625 mM -0.4 +0.6 -2.6 +1.0 +0.2
stress Benzalkonium Chloride 0.004 mg/ml +0.5 +0.8 -3.9 +1.2 +0.3
stress Nalidixic 0.006 mg/ml +0.0 +0.6 -3.3 +1.6 -0.0
stress Chloramphenicol 0.001 mg/ml +0.0 +0.4 -1.7 +2.8 +0.3
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM +0.1 -0.1 -1.6 +4.4 +0.1
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM +0.2 +0.2 -0.7 +3.2 +0.1
stress LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM +0.0 -0.0 -0.8 +3.7 +0.3
stress Chloramphenicol 0.0025 mg/ml +0.2 +0.4 -1.2 +4.4 +0.2
stress Tetracycline 0.0008 mg/ml +0.2 +0.2 -0.7 +4.1 +0.2
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM +0.0 -0.1 -0.9 +5.1 +0.1
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