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Protein
Homologs
Fitness for 5 genes in
Escherichia coli BW25113
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500 nt
yeiQ and yeiR are separated by 117 nucleotides
yeiR and b2174 are separated by 38 nucleotides
b2174 and spr are separated by 411 nucleotides
spr and rtn are separated by 180 nucleotides
b2172: yeiQ - predicted dehydrogenase, NAD-dependent (NCBI), at 2,264,267 to 2,265,733
yeiQ
b2173: yeiR - predicted enzyme (NCBI), at 2,265,851 to 2,266,837
yeiR
b2174: b2174 - orf, hypothetical protein (VIMSS), at 2,266,876 to 2,267,589
b2174
b2175: spr - predicted peptidase, outer membrane lipoprotein (NCBI), at 2,268,001 to 2,268,567
spr
b2176: rtn - hypothetical protein (NCBI), at 2,268,748 to 2,270,304
rtn
Group
Condition
b2172
b2173
b2174
b2175
b2176
yeiQ
yeiR
b2174
spr
rtn
stress
LB Aerobic with Ramoplanin 0.000125 mM
+0.0
+0.2
-1.8
-4.9
-0.5
stress
LB Anaerobic with Benzethonium chloride 0.00003125 mM
+0.0
+1.0
-4.3
-3.6
+0.1
stress
Trimethoprim 0.00125 mM
-0.0
+0.0
-0.9
-5.2
-0.1
stress
LB Aerobic with Ramoplanin 0.000125 mM
-0.1
-0.0
-1.7
-3.8
-0.2
stress
LB Anaerobic with Ramoplanin 0.0000625 mM
-0.1
-0.0
-0.1
-5.0
-0.0
stress
LB Aerobic with Trimethoprim 0.00000125 mM
+0.2
-0.0
-0.6
-4.4
-0.1
stress
LB Anaerobic with Mecillinam 0.00003125 mM
+0.0
-0.1
-0.3
-4.2
-0.1
motility
outer cut, LB soft agar motility assay
+0.1
+0.2
-0.4
-4.4
+0.0
plasmid transformation
mariner vector transformation; liquid outgrowth assay
+0.2
+0.4
-0.3
-4.7
+0.1
stress
Nalidixic 0.0313 mM
+0.1
+0.2
-3.4
-1.2
+0.0
stress
LB Aerobic with Irgasan 0.0000003125 mM
+0.2
+0.3
-1.6
-3.1
-0.0
stress
Trimethoprim 0.0025 mM
-0.1
+0.3
-1.2
-2.9
-0.2
stress
LB Anaerobic with Cephalothin 0.0000078125 mM
+0.3
+0.1
-2.6
-1.7
-0.1
stress
LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM
-0.1
-0.1
+0.3
-4.4
+0.1
stress
LB Aerobic with Trimethoprim 0.00000125 mM
-0.0
+0.3
-0.5
-3.5
-0.0
stress
LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM
+0.2
-0.4
+0.6
-3.5
+0.0
stress
2-Furfuraldehyde 0.25 vol%
+0.2
+0.5
-0.6
-3.0
+0.2
stress
Bacitracin 1 mg/ml
+0.1
+1.2
-1.7
-2.3
+0.4
stress
octanol 0.08 vol%
+0.1
+0.5
-4.9
+2.4
-0.1
stress
Aluminum chloride 5 mM
-0.5
-0.2
+1.8
-3.3
+0.5
stress
LB Aerobic with Doxycycline hyclate 0.00000625 mM
-0.4
+0.6
-2.6
+1.0
+0.2
stress
Benzalkonium Chloride 0.004 mg/ml
+0.5
+0.8
-3.9
+1.2
+0.3
stress
Nalidixic 0.006 mg/ml
+0.0
+0.6
-3.3
+1.6
-0.0
stress
Chloramphenicol 0.001 mg/ml
+0.0
+0.4
-1.7
+2.8
+0.3
stress
LB Aerobic with Phenazine ethosulfate 0.0000625 mM
+0.1
-0.1
-1.6
+4.4
+0.1
stress
LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM
+0.2
+0.2
-0.7
+3.2
+0.1
stress
LB Anaerobic with Ciprofloxacin Hydrochloride 0.0000000390625 mM
+0.0
-0.0
-0.8
+3.7
+0.3
stress
Chloramphenicol 0.0025 mg/ml
+0.2
+0.4
-1.2
+4.4
+0.2
stress
Tetracycline 0.0008 mg/ml
+0.2
+0.2
-0.7
+4.1
+0.2
stress
LB Aerobic with Phenazine ethosulfate 0.0000625 mM
+0.0
-0.1
-0.9
+5.1
+0.1
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