Fitness for 5 genes in Escherichia coli BW25113

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500 ntyeiT and yeiA overlap by 7 nucleotidesyeiA and mglC are separated by 242 nucleotidesmglC and mglA are separated by 15 nucleotidesmglA and mglB are separated by 60 nucleotides b2146: yeiT - predicted oxidoreductase (NCBI), at 2,232,055 to 2,233,293 yeiT b2147: yeiA - putative oxidoreductase (VIMSS), at 2,233,287 to 2,234,522 yeiA b2148: mglC - beta-methylgalactoside transporter inner membrane component (NCBI), at 2,234,765 to 2,235,775 mglC b2149: mglA - fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components (NCBI), at 2,235,791 to 2,237,311 mglA b2150: mglB - methyl-galactoside transporter subunit (NCBI), at 2,237,372 to 2,238,370 mglB
Group Condition b2146 b2147 b2148 b2149 b2150
yeiT yeiA mglC mglA mglB
carbon source D-Galactose (C) -0.1 -0.1 -0.5 -0.8 -1.4
carbon source carbon source D-Mannose 1mM -0.5 -0.2 -0.5 -1.2 -0.3
carbon source D-Galactose (C) -0.0 -0.2 -0.8 -0.6 -0.9
carbon source D-Galacturonic Acid (C) M9 +0.1 -0.2 -0.6 -0.6 -1.0
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM -0.5 +0.1 -0.6 -0.1 -1.1
phage RB68 -0.4 +0.2 -0.3 -0.5 -1.1
phage Ste41 -0.5 +0.1 -0.4 -0.2 -0.9
carbon source carbon source D-Mannose 5mM -0.3 -0.0 -0.3 -1.0 -0.4
carbon source carbon source D-Mannose 1mM -0.2 -0.3 -0.2 -0.5 -0.4
balo Mixed culture, Halobacteriovorax-1 -0.2 -0.2 -0.3 -0.3 -0.6
carbon source D-Galacturonic Acid (C) MOPS -0.0 -0.1 -0.3 -0.3 -0.8
carbon source carbon source D-Mannose 0.5mM -0.6 +0.1 -0.4 -0.8 +0.2
phage RB68 -0.2 +0.1 -0.2 -0.2 -0.9
carbon source D-Glucosamine Hydrochloride (C) +0.1 -0.0 -0.3 -0.2 -1.0
phage Ste41 -0.2 +0.3 -0.2 -0.5 -0.7
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.1 +0.2 -1.2 -0.6 +0.3
carbon source succinate (C) -0.0 +0.0 -1.0 +0.4 -0.5
stress Cephalothin 0.01 mg/ml +0.3 -0.5 -0.1 +0.2 -0.9
carbon source succinate (C) +0.1 +0.0 -0.9 +0.3 -0.4
stress LB Aerobic with Ramoplanin 0.000125 mM -0.4 -0.2 -0.7 -0.3 +0.7
phage T7_phage 0.0015625 MOI TC2 +0.3 +0.2 +0.2 -0.3 -0.7
stress Cisplatin 0.1 mg/ml -0.1 +0.3 +0.3 +0.2 -0.6
phage R1_N4_T2_phage8 +0.7 +0.3 -0.0 +0.4 -1.0
predation 6 hr rep2_HD100_10fold_dilution_grewON +0.3 -0.4 -0.6 +0.3 +0.6
control PBS_cage_1_mice _Feces_16 hr +0.3 -0.1 +0.4 +0.5 -0.5
predation 48 hr rep1_HD100_no_dilution -0.1 +0.0 +0.5 +0.6 +0.4
phage N4_phage 0.009375 MOI TC2 +0.1 +0.6 +0.5 +0.5 -0.1
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.1 +0.0 +1.7 +1.5 +1.8
plasmid transformation mariner vector transformation; liquid outgrowth assay -0.0 -0.2 +2.1 +1.6 +2.3
plasmid transformation mariner vector transformation; liquid outgrowth assay +0.0 -0.2 +2.0 +1.7 +2.3
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