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Homologs
Fitness for 5 genes in
Escherichia coli BW25113
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500 nt
yeiT and yeiA overlap by 7 nucleotides
yeiA and mglC are separated by 242 nucleotides
mglC and mglA are separated by 15 nucleotides
mglA and mglB are separated by 60 nucleotides
b2146: yeiT - predicted oxidoreductase (NCBI), at 2,232,055 to 2,233,293
yeiT
b2147: yeiA - putative oxidoreductase (VIMSS), at 2,233,287 to 2,234,522
yeiA
b2148: mglC - beta-methylgalactoside transporter inner membrane component (NCBI), at 2,234,765 to 2,235,775
mglC
b2149: mglA - fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components (NCBI), at 2,235,791 to 2,237,311
mglA
b2150: mglB - methyl-galactoside transporter subunit (NCBI), at 2,237,372 to 2,238,370
mglB
Group
Condition
b2146
b2147
b2148
b2149
b2150
yeiT
yeiA
mglC
mglA
mglB
carbon source
D-Galactose (C)
-0.1
-0.1
-0.5
-0.8
-1.4
carbon source
carbon source D-Mannose 1mM
-0.5
-0.2
-0.5
-1.2
-0.3
carbon source
D-Galactose (C)
-0.0
-0.2
-0.8
-0.6
-0.9
carbon source
D-Galacturonic Acid (C) M9
+0.1
-0.2
-0.6
-0.6
-1.0
stress
LB Anaerobic with Nitrofurantoin 0.00003125 mM
-0.5
+0.1
-0.6
-0.1
-1.1
phage
RB68
-0.4
+0.2
-0.3
-0.5
-1.1
phage
Ste41
-0.5
+0.1
-0.4
-0.2
-0.9
carbon source
carbon source D-Mannose 5mM
-0.3
-0.0
-0.3
-1.0
-0.4
carbon source
carbon source D-Mannose 1mM
-0.2
-0.3
-0.2
-0.5
-0.4
balo
Mixed culture, Halobacteriovorax-1
-0.2
-0.2
-0.3
-0.3
-0.6
carbon source
D-Galacturonic Acid (C) MOPS
-0.0
-0.1
-0.3
-0.3
-0.8
carbon source
carbon source D-Mannose 0.5mM
-0.6
+0.1
-0.4
-0.8
+0.2
phage
RB68
-0.2
+0.1
-0.2
-0.2
-0.9
carbon source
D-Glucosamine Hydrochloride (C)
+0.1
-0.0
-0.3
-0.2
-1.0
phage
Ste41
-0.2
+0.3
-0.2
-0.5
-0.7
micoeukaryotes
Tetrahymena sp., Mixed culture-1
+0.1
+0.2
-1.2
-0.6
+0.3
carbon source
succinate (C)
-0.0
+0.0
-1.0
+0.4
-0.5
stress
Cephalothin 0.01 mg/ml
+0.3
-0.5
-0.1
+0.2
-0.9
carbon source
succinate (C)
+0.1
+0.0
-0.9
+0.3
-0.4
stress
LB Aerobic with Ramoplanin 0.000125 mM
-0.4
-0.2
-0.7
-0.3
+0.7
phage
T7_phage 0.0015625 MOI TC2
+0.3
+0.2
+0.2
-0.3
-0.7
stress
Cisplatin 0.1 mg/ml
-0.1
+0.3
+0.3
+0.2
-0.6
phage
R1_N4_T2_phage8
+0.7
+0.3
-0.0
+0.4
-1.0
predation
6 hr rep2_HD100_10fold_dilution_grewON
+0.3
-0.4
-0.6
+0.3
+0.6
control
PBS_cage_1_mice _Feces_16 hr
+0.3
-0.1
+0.4
+0.5
-0.5
predation
48 hr rep1_HD100_no_dilution
-0.1
+0.0
+0.5
+0.6
+0.4
phage
N4_phage 0.009375 MOI TC2
+0.1
+0.6
+0.5
+0.5
-0.1
plasmid transformation
mariner vector transformation; liquid outgrowth assay
-0.1
+0.0
+1.7
+1.5
+1.8
plasmid transformation
mariner vector transformation; liquid outgrowth assay
-0.0
-0.2
+2.1
+1.6
+2.3
plasmid transformation
mariner vector transformation; liquid outgrowth assay
+0.0
-0.2
+2.0
+1.7
+2.3
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