Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b4679	b2140	b2141	b2142	b2143
		yohP	dusC	yohJ	yohK	cdd
stress	LB Aerobic with Phenazine ethosulfate 0.0000625 mM	+0.4	+0.3	-4.6	-2.9	-0.0
stress	LB Anaerobic with Benzethonium chloride 0.00003125 mM	-0.9	+0.3	-0.3	-4.3	-0.5
stress	Spectinomycin 0.0125 mg/ml	-0.4	+0.0	-0.9	-0.2	-4.1
stress	1-ethyl-3-methylimidazolium chloride 40 mM	-0.1	+0.2	-0.1	-0.4	-4.6
attachment_assay_attached_sample	Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	-3.5	-0.6	-0.9	-0.2	+0.7
stress	1-ethyl-3-methylimidazolium chloride 80 mM	-0.6	+0.0	+0.3	-0.4	-3.7
stress	1-ethyl-3-methylimidazolium acetate 30 mM	-0.5	+0.0	-0.5	-0.1	-3.1
stress	Benzalkonium Chloride 0.004 mg/ml	-1.0	+0.5	-0.4	-1.5	-1.4
stress	LB Anaerobic with Vancomycin Hydrochloride from Streptomyces orientalis 0.00003125 mM	-0.6	-0.1	-1.3	-0.4	-0.9
stress	1-ethyl-3-methylimidazolium acetate 60 mM	-0.2	+0.0	-0.3	-0.2	-2.5
balo	Mixed culture, Halobacteriovorax-10	-1.2	-0.1	-0.9	+0.2	-1.0
attachment_assay_attached_sample	Time0_Wash=None; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB	-2.8	-0.4	+0.1	-0.1	+0.6
predation	6 hr rep1_HD100_10fold_dilution_grewON	-2.6	+0.3	+0.5	-0.7	+0.0
plasmid transformation	mariner vector transformation; liquid outgrowth assay	+1.1	-0.1	-3.4	-0.3	+0.4
stress	LB Aerobic with Phenazine ethosulfate 0.0000625 mM	-0.1	+0.6	-1.0	-1.9	+0.4
carbon source	Cytidine 0.41115 mM (C)	+0.1	+0.2	+0.3	+0.0	-2.6
carbon source	Cytidine 0.41115 mM (C)	+0.6	-0.1	-0.0	-0.2	-2.1
phage	T7_phage 0.00015625 MOI TC4	-1.6	-0.6	-0.2	+0.3	+0.5
stress	Aluminum chloride 5 mM	-0.5	+0.1	-1.9	+0.8	+0.1
motility	outer cut, LB soft agar motility assay	+0.9	-0.7	-0.6	-0.2	-0.7
carbon source	carbon source D-Mannose 1mM	-2.2	+0.1	-0.0	+0.5	+0.4
carbon source	carbon source D-Mannose 0.5mM	-1.5	-0.0	+0.8	+0.3	-0.5
carbon source	Cytidine 0.41115 mM (C)	+0.6	-0.0	+0.4	+0.1	-1.8
carbon source	carbon source D-Glucose 5mM	-2.2	+0.1	+0.7	+0.7	+0.2
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	+0.4	+0.4	-0.5	+0.7	-1.0
carbon source	acetate (C)	+0.9	+0.1	+0.9	+0.5	-0.7
carbon source	carbon source D-Glucose 0.25mM	-0.2	+0.2	+1.5	-0.0	+1.1
carbon source	Glycolic Acid (C)	+0.6	+0.2	+1.3	+1.6	-0.4
phage	Papa dilution 10-1 cacl2 maltose	+0.7	+0.5	+0.4	+1.1	+0.9
carbon source	Glycolic Acid (C)	+0.9	+0.3	+1.9	+1.3	-0.3