Fitness for 5 genes in Escherichia coli BW25113

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500 ntyehS and yehT are separated by 46 nucleotidesyehT and yehU overlap by 4 nucleotidesyehU and mlrA are separated by 221 nucleotidesmlrA and yohO are separated by 59 nucleotides b2124: yehS - hypothetical protein (NCBI), at 2,209,748 to 2,210,218 yehS b2125: yehT - orf, hypothetical protein (VIMSS), at 2,210,265 to 2,210,984 yehT b2126: yehU - predicted sensory kinase in two-component system with YehT (NCBI), at 2,210,981 to 2,212,666 yehU b2127: mlrA - DNA-binding transcriptional regulator (NCBI), at 2,212,888 to 2,213,619 mlrA b4542: yohO - hypothetical protein (NCBI), at 2,213,679 to 2,213,786 yohO
Group Condition b2124 b2125 b2126 b2127 b4542
yehS yehT yehU mlrA yohO
carbon source pyruvate (C) +0.1 -2.1 -1.3 -0.4 N.D.
carbon source pyruvate (C) +0.0 -2.2 -1.4 -0.0 N.D.
phage Δdbn_10 -0.2 -0.8 +0.0 -1.4 N.D.
carbon source D-Glucuronic Acid (C) -0.2 -1.1 -0.8 -0.1 N.D.
carbon source D-Serine (C) +0.2 -1.3 -0.3 -0.4 N.D.
gfp_control GFP_control -0.4 -1.0 -0.5 +0.4 N.D.
stress Spectinomycin 0.0125 mg/ml +0.2 -1.0 -0.9 +0.2 N.D.
drt_type_3 DRT_type_3 -0.4 -0.6 -0.7 +0.5 N.D.
carbon source Guanosine 0.35306 mM (C) -0.3 -0.7 -0.0 +2.3 N.D.
carbon source Ying_Nucleobase14 rep C; time point 3 +0.3 -0.2 -0.1 +1.9 N.D.
carbon source Ying_Others16 rep C; time point 1 -0.1 -0.2 -0.0 +2.4 N.D.
carbon source Ying_Nucleobase14 rep B; time point 3 +0.5 -0.2 +0.0 +1.7 N.D.
carbon source Ying_Others16 rep B; time point 1 +0.0 +0.1 +0.0 +2.0 N.D.
carbon source Ying_Nucleobase14 rep A; time point 3 +0.7 -0.1 -0.0 +1.8 N.D.
carbon source Inosine 0.3728 mM (C) -0.2 -0.0 +0.1 +2.5 N.D.
carbon source Guanosine 0.35306 mM (C) -0.1 -0.0 -0.1 +2.7 N.D.
carbon source Adenosine 0.3742 mM (C) +0.0 +0.1 -0.1 +2.6 N.D.
carbon source Inosine 0.3728 mM (C) -0.1 -0.2 -0.0 +2.8 N.D.
carbon source Adenosine 0.3742 mM (C) -0.4 +0.0 -0.1 +3.4 N.D.
carbon source LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C) -0.2 -0.1 -0.1 +3.6 N.D.
carbon source Adenosine 0.3742 mM (C) +0.2 +0.0 -0.1 +3.5 N.D.
carbon source Guanosine 0.35306 mM (C) -0.1 +0.2 -0.1 +4.0 N.D.
carbon source LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C) +0.1 -0.2 -0.1 +4.6 N.D.
carbon source Inosine 0.3728 mM (C) +0.1 +0.4 -0.2 +4.1 N.D.
carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) +0.1 -0.2 -0.0 +4.7 N.D.
carbon source Ying_Others16 rep B; time point 2 -0.4 -0.5 -0.1 +5.8 N.D.
carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) -0.1 -0.2 +0.1 +5.5 N.D.
carbon source LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C) +0.1 -0.4 +0.0 +5.5 N.D.
carbon source Ying_Others16 rep A; time point 2 -0.1 -0.4 +0.1 +5.7 N.D.
carbon source LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C) +0.2 +0.1 -0.1 +6.2 N.D.
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