Fitness for 5 genes in Escherichia coli BW25113

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500 ntazuC and yecR are separated by 262 nucleotidesyecR and ftn are separated by 170 nucleotidesftn and yecH are separated by 37 nucleotidesyecH and tyrP are separated by 190 nucleotides b4663: azuC - expressed protein (RefSeq), at 1,985,897 to 1,985,983 azuC b1904: yecR - hypothetical protein (NCBI), at 1,986,246 to 1,986,569 yecR b1905: ftn - ferritin iron storage protein (cytoplasmic) (NCBI), at 1,986,740 to 1,987,237 ftn b1906: yecH - hypothetical protein (NCBI), at 1,987,275 to 1,987,514 yecH b1907: tyrP - tyrosine transporter (NCBI), at 1,987,705 to 1,988,916 tyrP
Group Condition b4663 b1904 b1905 b1906 b1907
azuC yecR ftn yecH tyrP
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM N.D. -1.2 -1.2 N.D. -1.3
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM N.D. +0.2 -0.2 N.D. -3.4
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM N.D. -0.7 -1.4 N.D. -1.3
stress LB Aerobic with Zinc Pyrithione 0.0000025 mM N.D. -0.2 -0.5 N.D. -2.4
stress LB Anaerobic with Nitrofurantoin 0.000015625 mM N.D. -0.3 -1.1 N.D. -1.4
motility outer cut, LB soft agar motility assay N.D. -2.1 -0.4 N.D. -0.2
stress LB Aerobic with Phenazine ethosulfate 0.0000625 mM N.D. +0.4 +0.0 N.D. -3.1
motility outer cut, LB soft agar motility assay N.D. -1.5 -0.2 N.D. -0.9
carbon source carbon source D-Glucose 0.25mM N.D. -2.1 -0.1 N.D. -0.3
M9 Acetate 0.5% aerobic N.D. -0.5 -1.0 N.D. -1.0
carbon source Glycolic Acid (C) N.D. -0.3 -1.3 N.D. -0.9
stress Trimethoprim 0.0025 mM N.D. -1.5 -0.1 N.D. -0.7
stress LB Aerobic with Novobiocin 0.0000625 mM N.D. -0.6 -0.2 N.D. -1.4
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM N.D. -0.1 -0.8 N.D. -1.4
M9 Glucose 2% anaerobic N.D. -0.8 -0.9 N.D. -0.5
M9 Glucose 2% aerobic N.D. -0.6 -0.8 N.D. -0.7
phage R2_N4_T2_phage10 N.D. -1.0 +0.1 N.D. -1.1
M9 Glucose 2% aerobic N.D. -0.4 -0.8 N.D. -0.7
stress Cisplatin 0.1 mg/ml N.D. -0.6 +0.2 N.D. -1.6
stress LB Anaerobic with Irgasan 0.000000625 mM N.D. -0.8 -0.8 N.D. -0.3
M9 Glucose 2%, 20 mM NO3- anaerobic N.D. -0.6 -0.8 N.D. -0.5
stress LB Aerobic with 2-Mercaptopyridine N-oxide 0.0000078125 mM N.D. +0.1 -0.5 N.D. -1.4
carbon source Glycolic Acid (C) N.D. +0.3 -1.1 N.D. -1.0
carbon source carbon source D-Mannose 1mM N.D. -1.3 -0.6 N.D. +0.1
stress LB Aerobic with Nitrofurantoin 0.00003125 mM N.D. +0.6 -1.0 N.D. -0.9
phage Δdbn_10 N.D. +0.2 +0.3 N.D. -1.6
phage N4_phage 0.0009375 MOI TC3 N.D. -1.2 -0.0 N.D. +0.7
phage Ste41 N.D. +1.3 +0.5 N.D. -0.7
phage Papa dilution 10-1 cacl2 maltose N.D. +1.4 +0.5 N.D. +0.1
phage RB68 N.D. +1.4 +0.6 N.D. +0.5
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