Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b1686	b1687	b1688	b4431	b1689
		ydiI	ydiJ	ydiK	rprA	b1689
carbon source	carbon source D-Mannose 5mM	-6.1	-0.8	-1.6	+0.1	+0.7
carbon source	carbon source D-Mannose 0.5mM	+0.1	-0.1	-0.4	-5.3	-1.5
stress	LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM	-2.2	-0.2	-0.2	-3.4	-0.6
phage	Phage_N4_cage_3_mouse_4_Cecum_40 hr	+0.4	+0.3	-0.2	-6.2	-0.4
stress	LB Anaerobic with Levofloxacin 0.00000003125 mM	-2.5	-0.0	-0.1	-1.2	-0.5
no stress control anaerobic	M9 no stress control; Anaerobic 24 hr	-1.2	-2.1	-0.3	-0.5	-0.1
stress	LB Anaerobic with Ampicillin 0.00000195313 mM	-3.2	+0.3	-0.0	-0.8	-0.3
control	PBS_cage_1_mice _Feces_16 hr	-1.1	-0.3	-0.6	+0.2	-2.1
control	PBS_cage_1_mice _Feces_40 hr	-1.8	-0.5	-0.5	+0.5	-1.5
carbon source	carbon source D-Mannose 0.5mM	+0.1	-0.5	-0.1	-2.8	-0.4
no stress control anaerobic	M9 no stress control; Anaerobic 24 hr	-1.5	-1.6	-0.2	-0.3	+0.0
stress	LB Anaerobic with Sulfamonomethoxine 0.00003125 mM	-2.0	+0.1	+0.0	-1.3	-0.3
no stress control anaerobic	M9 no stress control; Anaerobic 48 hr	-1.2	-2.0	+0.0	+0.1	-0.4
stress	LB Anaerobic with Azlocillin 0.00003125 mM	-0.1	-0.0	+0.0	-3.1	-0.2
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	+0.8	+0.4	+0.0	-3.0	-1.1
no stress control anaerobic	M9 no stress control; Anaerobic 48 hr	-1.1	-1.9	-0.0	+0.4	+0.1
carbon source	carbon source D-Glucose 20mM	+0.3	-0.2	-0.0	-2.8	+0.2
no stress control anaerobic	M9 no stress control; Anaerobic 24 hr	-1.2	-1.7	+0.1	+0.5	+0.1
balo	Mixed culture, Halobacteriovorax-1	+0.5	-0.5	+0.2	-1.8	-0.5
phage	N4_phage 0.0009375 MOI TC3	-1.9	+0.4	-0.0	-1.1	+0.5
phage	TP4	-2.2	+0.2	-0.1	-0.7	+1.0
control	PBS_cage_1_mouse_1_Cecum_40 hr	-0.3	+0.0	+0.5	+0.7	-1.9
phage	N4_phage 0.0009375 MOI TC2	+0.7	+0.3	+0.3	-1.4	-0.8
plasmid transformation	mariner vector transformation; liquid outgrowth assay	+1.1	+0.5	-0.2	-1.3	-0.9
stress	Cisplatin 0.1 mg/ml	+1.4	+0.2	+0.2	-1.3	-0.3
carbon source	carbon source D-Glucose 0.25mM	+2.6	-0.4	+0.1	-1.1	-0.9
plasmid transformation	mariner vector transformation; liquid outgrowth assay	+1.1	+0.5	-0.6	-1.0	+0.4
motility	inner cut, LB soft agar motility assay	+2.2	+0.1	-0.3	-0.8	-0.1
predation	6 hr rep2_HD100_10fold_dilution_grewON	+1.7	-0.2	-0.3	+1.3	-0.8
carbon source	carbon source D-Glucose 5mM	+1.1	-0.2	-0.6	+1.0	+1.2