Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1179 experiments or choose conditions or try the comparative fitness browser

500 ntydhB and ydhC are separated by 112 nucleotidesydhC and cfa are separated by 290 nucleotidescfa and ribC are separated by 39 nucleotidesribC and mdtK are separated by 214 nucleotides b1659: ydhB - predicted DNA-binding transcriptional regulator (NCBI), at 1,736,890 to 1,737,822 ydhB b1660: ydhC - predicted transporter (NCBI), at 1,737,935 to 1,739,146 ydhC b1661: cfa - cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI), at 1,739,437 to 1,740,585 cfa b1662: ribC - riboflavin synthase subunit alpha (NCBI), at 1,740,625 to 1,741,266 ribC b1663: mdtK - multidrug efflux protein NorM (NCBI), at 1,741,481 to 1,742,854 mdtK
Group Condition b1659 b1660 b1661 b1662 b1663
ydhB ydhC cfa ribC mdtK
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM -1.9 -2.3 +0.1 N.D. -4.1
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -0.9 -1.6 +0.3 N.D. -5.1
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -1.1 -0.1 +0.1 N.D. -5.0
stress LB Anaerobic with Chlorhexidine diacetate salt 0.000000625 mM -1.0 -1.1 +0.7 N.D. -4.2
control PBS_cage_1_mouse_1_Cecum_40 hr -0.9 -0.8 -1.0 N.D. +0.4
carbon source Adenosine 0.3742 mM (C) -1.3 -1.5 -0.3 N.D. +1.0
carbon source Adenosine 0.3742 mM (C) -1.7 -1.2 -0.3 N.D. +1.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.4 -0.2 -0.3 N.D. -2.0
stress Trimethoprim 0.0025 mM -0.4 +0.3 -0.8 N.D. -1.1
carbon source Ying_Nucleobase14 rep B; time point 2 -1.8 -1.6 -0.1 N.D. +1.7
motility outer cut, LB soft agar motility assay -1.4 -1.0 +0.7 N.D. +0.2
carbon source Ying_Nucleobase14 rep C; time point 3 -1.6 -1.7 -0.3 N.D. +2.0
carbon source Ying_Nucleobase14 rep A; time point 2 -1.1 -1.7 -0.2 N.D. +1.6
stress 1-ethyl-3-methylimidazolium chloride 80 mM +0.6 -0.3 +0.3 N.D. -2.0
carbon source Ying_Nucleobase14 rep C; time point 2 -1.4 -1.1 -0.2 N.D. +1.4
stress Benzalkonium Chloride 0.004 mg/ml -2.1 -0.3 +0.2 N.D. +1.0
carbon source Inosine 0.3728 mM (C) -1.7 -1.0 +0.2 N.D. +1.5
carbon source Adenosine 0.3742 mM (C) -1.3 -1.0 +0.1 N.D. +1.0
carbon source Ying_Nucleobase14 rep A; time point 3 -1.1 -1.7 -0.3 N.D. +2.0
stress Nickel (II) chloride 1.5 mM -1.2 -0.1 +0.9 N.D. -0.6
carbon source Ying_Nucleobase14 rep B; time point 3 -2.1 -1.3 +0.1 N.D. +2.3
carbon source Guanosine 0.35306 mM (C) -1.0 -1.2 +0.4 N.D. +1.1
stress LB Aerobic with Irgasan 0.0000003125 mM -0.5 -0.4 +1.5 N.D. -1.3
carbon source Guanosine 0.35306 mM (C) -1.0 -1.4 +0.2 N.D. +1.6
carbon source Inosine 0.3728 mM (C) -1.8 -0.7 +0.5 N.D. +1.5
stress octanol 0.08 vol% +0.9 +0.3 -0.5 N.D. -1.0
carbon source Inosine 0.3728 mM (C) +0.1 -1.8 +0.1 N.D. +1.6
carbon source carbon source D-Mannose 5mM +0.6 +0.6 +0.6 N.D. -1.0
phage Ste41 +2.2 +0.4 -0.1 N.D. -0.2
phage Laval1267 +0.5 +0.3 +2.1 N.D. +0.2
remove
b1659
plot		 remove
b1660
plot		 remove
b1661		 remove
b1662
plot		 remove
b1663
plot