Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1193 experiments or choose conditions or try the comparative fitness browser

500 ntosmC and ddpF are separated by 55 nucleotidesddpF and ddpD overlap by 8 nucleotidesddpD and ddpC overlap by 4 nucleotidesddpC and ddpB overlap by 4 nucleotides b1482: osmC - osmotically inducible, stress-inducible membrane protein (NCBI), at 1,554,649 to 1,555,080 osmC b1483: ddpF - D-ala-D-ala transporter subunit (NCBI), at 1,555,136 to 1,556,062 ddpF b1484: ddpD - D-ala-D-ala transporter subunit (NCBI), at 1,556,055 to 1,557,041 ddpD b1485: ddpC - D-ala-D-ala transporter subunit (NCBI), at 1,557,038 to 1,557,934 ddpC b1486: ddpB - D-ala-D-ala transporter subunit (NCBI), at 1,557,931 to 1,558,953 ddpB
Group Condition b1482 b1483 b1484 b1485 b1486
osmC ddpF ddpD ddpC ddpB
phage T7_phage 0.0015625 MOI TC2 -2.1 -0.2 +0.0 -4.5 -2.7
motility outer cut, LB soft agar motility assay +0.0 +0.1 -0.4 +0.3 -6.0
nophagecontrol R1_N4_T1_phage0 -5.0 -0.7 +0.3 -0.4 +0.3
stress LB Anaerobic with Norfloxacin 0.0000000390625 mM -4.0 -0.1 +0.2 -0.5 -0.3
phage N4_phage 0.00009375 MOI TC5 -2.6 -0.1 -0.2 -0.2 -1.4
stress LB Anaerobic with Furaltadone 0.000015625 mM -2.9 -0.4 +0.2 -0.9 +0.2
plasmid transformation mariner vector transformation; liquid outgrowth assay -2.5 -0.0 -0.1 -0.8 +0.0
motility outer cut, LB soft agar motility assay +0.2 +0.1 -0.4 -1.5 -1.6
stress LB Anaerobic with Benzethonium chloride 0.00003125 mM -2.5 +0.1 -0.6 +0.0 -0.3
predation 6 hr rep2_HD100_10fold_dilution_grewON -2.6 -0.2 -0.1 -1.0 +0.8
plasmid transformation mariner vector transformation; liquid outgrowth assay -2.0 -0.1 +0.3 -0.7 -0.7
stress LB Aerobic with Spiramycin 0.000125 mM -3.2 +0.0 -0.1 +0.1 +0.3
plasmid transformation vcDART vector transformation; liquid outgrowth assay -2.0 +0.0 +0.2 -0.3 -0.8
phage N4_phage 0.0009375 MOI TC2 -1.3 +0.2 -0.2 -1.1 -0.6
phage N4_phage 0.00009375 MOI TC3 -1.7 +0.2 -0.0 -1.1 -0.1
stress LB Aerobic with Chlorhexidine diacetate salt 0.000000625 mM -1.4 -0.3 +0.6 -1.7 +0.1
stress LB Anaerobic with Oxytetracycline 0.00000015625 mM -2.7 +0.0 +0.4 -0.1 -0.1
mzaabcde mzaABCDE -1.9 +0.0 +0.2 +0.3 -1.2
phage N4_phage 0.00009375 MOI TC4 -1.1 +0.2 -0.5 -1.6 +0.6
attachment_assay_attached_sample Time0_Wash=PBS; Attachment_time=2hrs; Attachment_surface=PDMS; Sample_type=attached; Outgrowth=LB -2.4 -0.1 -0.2 -0.3 +0.5
stress LB Anaerobic with Nitrofurantoin 0.00003125 mM -1.7 -0.2 +0.8 -0.7 -0.4
phage T7_phage 0.00015625 MOI TC3 +0.9 -0.0 -0.5 -0.9 -1.6
stress LB Anaerobic with Phenazine ethosulfate 0.000125 mM -2.4 +0.4 +0.4 -0.3 +0.1
stress LB Aerobic with Trimethoprim 0.00000125 mM -2.4 -0.2 +0.2 -0.0 +0.6
sir2-hera SIR2-HerA -0.8 +0.0 +0.4 +0.5 -1.6
phage Lambda_ci1857 -1.1 +0.2 +0.3 +0.4 -1.3
stress LB Anaerobic with Spiramycin 0.000125 mM -2.1 +0.2 +0.3 -0.4 +0.5
phage Δdbn_10 -2.1 -0.1 -0.4 +0.6 +0.6
stress LB Anaerobic with Levofloxacin 0.0000000625 mM -1.5 +0.1 +0.4 -0.7 +0.6
stress Chlorite 1.25 mM +1.1 +0.1 -0.3 -0.1 -1.5
remove
b1482
plot
remove
b1483
plot
remove
b1484
remove
b1485
plot
remove
b1486
plot