Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b1422	b1423	b1424	b1426	b1427
		ydcI	ydcJ	mdoD	ydcH	rimL
carbon source	carbon source D-Mannose 1mM	+0.0	+0.0	-0.1	-6.2	-0.2
phage	T7_phage 0.0015625 MOI TC2	-2.0	-0.2	+0.4	-0.1	-3.9
stress	LB Aerobic with Phenazine ethosulfate 0.0000625 mM	-0.3	-0.6	-0.6	-3.9	+0.5
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-5.8	+0.3	+0.6	+0.8	+0.1
stress	LB Aerobic with Irgasan 0.0000003125 mM	+0.2	-0.4	+0.1	-1.8	-1.5
carbon source	D-Glucosamine Hydrochloride (C)	-0.1	-0.4	-0.3	-3.1	+0.5
carbon source	acetate (C)	+1.2	-0.6	-0.6	-3.7	+0.6
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-3.9	+0.3	+0.8	-0.5	+0.5
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-3.7	+0.8	+0.6	-0.3	+0.2
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-4.8	+0.3	+1.1	-0.5	+1.9
carbon source	Ying_sugar7 rep C; time point 3	+0.9	-0.8	-0.5	-1.8	+0.5
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	-2.8	+0.0	+0.2	+0.7	+0.1
carbon source	acetate (C)	+1.2	-0.6	-0.7	-1.9	+0.6
protonated/deuterated	deuterated glucose in H2O	+0.6	-0.4	+0.1	-2.4	+0.8
carbon source	succinate (C)	+1.7	-0.2	-0.9	-1.8	+0.6
carbon source	a-Ketoglutaric (C)	+3.5	-0.7	-0.6	-2.9	+0.3
plasmid transformation	mariner vector transformation; liquid outgrowth assay	-2.6	+0.4	+0.5	+0.6	+0.8
carbon source	D-Lactate (C)	+1.8	-0.6	-0.5	-1.3	+0.3
carbon source	a-Ketoglutaric (C)	+3.5	-0.9	-0.8	-2.1	+0.2
carbon source	L-Malic (C)	+2.4	-0.2	-1.3	-1.2	+0.3
carbon source	L-Malic (C)	+2.5	-0.2	-0.9	-1.5	+0.1
stress	LB Aerobic with Ramoplanin 0.000125 mM	+0.1	-0.7	+2.1	-0.5	-0.7
control	PBS_cage_2_mouse_2_Cecum_40 hr	-0.3	-0.6	-0.4	+2.6	-1.0
control	PBS_cage_1_mouse_1_Cecum_40 hr	-0.5	-0.9	-0.7	+1.4	+1.0
phage	T7_phage 0.00015625 MOI TC4	-1.3	+0.8	+0.2	+1.7	-0.3
phage	T7_phage 0.0015625 MOI TC1	-0.6	+0.6	+0.4	+1.8	-0.5
carbon source	Ying_OrganicAcid7 rep B; time point 3	+2.7	+0.2	-0.2	-0.6	+0.3
stress	LB Aerobic with Ramoplanin 0.000125 mM	+0.5	-1.1	+2.5	+0.5	+0.2
control	PBS_cage_2_mice _Feces_16 hr	-0.1	+0.5	-0.6	+3.0	+0.3
stress	Bacitracin 1 mg/ml	-0.2	+0.3	+3.4	+0.8	+0.0