Fitness for 5 genes in Escherichia coli BW25113

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	b1284	b4596	b1285	b4672	b1286
		yciT	yciZ	gmr	ymiB	rnb
predation	6 hr rep1_HD100_10fold_dilution_grewON	-0.7	-4.7	-0.3	N.D.	-4.6
carbon source	carbon source D-Mannose 0.5mM	-0.7	-4.0	-2.4	N.D.	-3.1
carbon source	Ying_sugar7 rep B; time point 3	+0.4	+0.0	-7.6	N.D.	-2.0
carbon source	Ying_sugar7 rep C; time point 3	+0.5	-0.4	-7.5	N.D.	-1.8
carbon source	Ying_sugar7 rep A; time point 3	+0.3	+0.0	-6.3	N.D.	-2.1
carbon source	Ying_sugar7 rep C; time point 2	+0.0	+0.1	-6.2	N.D.	-2.0
carbon source	carbon source D-Mannose 1mM	-0.4	-4.0	-1.9	N.D.	-1.0
carbon source	Ying_sugar7 rep A; time point 2	-0.1	-0.2	-5.2	N.D.	-1.5
carbon source	Ying_sugar7 rep B; time point 2	+0.1	-0.2	-4.4	N.D.	-2.3
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.1	-2.7	-0.7	N.D.	-3.0
carbon source	Ying_sugar7 rep A; time point 1	-0.2	-0.3	-4.6	N.D.	-0.9
predation	6 hr rep2_HD100_10fold_dilution_grewON	-0.2	-0.3	-0.8	N.D.	-4.2
carbon source	Ying_sugar7 rep C; time point 1	-0.0	-0.3	-3.7	N.D.	-1.1
carbon source	Ying_sugar7 rep B; time point 1	-0.2	+0.1	-4.3	N.D.	-0.7
carbon source	carbon source D-Mannose 0.5mM	+0.1	+0.2	-1.7	N.D.	-2.7
carbon source	carbon source D-Mannose 5mM	-0.2	+1.0	-2.0	N.D.	-1.7
motility	outer cut, LB soft agar motility assay	+1.8	+0.5	+0.1	N.D.	-4.5
carbon source	Ying_Nucleobase14 rep B; time point 2	+0.9	+0.6	-3.0	N.D.	-0.5
carbon source	Ying_Nucleobase14 rep B; time point 3	+1.1	+1.2	-4.3	N.D.	+0.6
motility	outer cut, LB soft agar motility assay	+2.5	+1.1	-0.3	N.D.	-4.2
carbon source	Ying_Nucleobase14 rep C; time point 3	+1.1	+1.0	-2.9	N.D.	+0.4
carbon source	LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C)	+1.2	+1.1	-1.8	N.D.	+1.0
carbon source	LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C)	+1.6	+0.9	-2.2	N.D.	+1.2
carbon source	LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C)	+1.6	+0.2	-1.6	N.D.	+1.4
carbon source	LMW_DNA_from_Pseudomonas_EB271-B4-1 12 ppm (C)	+2.1	+1.1	-1.3	N.D.	+0.9
carbon source	LMW_DNA_from_Lysinibacillus_FW301-JW8 7.7 ppm (C)	+2.3	+1.3	-1.5	N.D.	+0.9
motility	outer cut, LB soft agar motility assay	+1.4	+2.8	+0.0	N.D.	-1.1
plasmid transformation	vcDART vector transformation; agar assay	+0.9	-0.8	-0.1	N.D.	+3.3
plasmid transformation	vcDART vector transformation; agar assay	+0.5	+0.3	-0.0	N.D.	+3.7
plasmid transformation	vcDART vector transformation; liquid outgrowth assay	+1.2	+0.5	-0.4	N.D.	+4.1