Fitness for 5 genes in Escherichia coli BW25113

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500 ntompW and yciE are separated by 59 nucleotidesyciE and yciF are separated by 45 nucleotidesyciF and yciG are separated by 85 nucleotidesyciG and trpA are separated by 380 nucleotides b1256: ompW - outer membrane protein W (NCBI), at 1,312,044 to 1,312,682 ompW b1257: yciE - hypothetical protein (NCBI), at 1,312,742 to 1,313,248 yciE b1258: yciF - hypothetical protein (NCBI), at 1,313,294 to 1,313,794 yciF b1259: yciG - orf, hypothetical protein (VIMSS), at 1,313,880 to 1,314,059 yciG b1260: trpA - tryptophan synthase subunit alpha (NCBI), at 1,314,440 to 1,315,246 trpA
Group Condition b1256 b1257 b1258 b1259 b1260
ompW yciE yciF yciG trpA
carbon source carbon source D-Glucose 0.25mM -0.3 -1.3 -1.5 -3.3 -10.0
carbon source carbon source D-Mannose 0.5mM -0.0 -1.7 -1.9 -0.9 -10.5
carbon source carbon source D-Mannose 20mM +0.1 -1.7 -2.0 -0.7 -10.7
carbon source carbon source D-Mannose 5mM +0.2 -1.5 -1.0 -0.8 -10.4
carbon source Ying_OrganicAcid7 rep B; time point 2 +0.0 -0.7 -1.6 -0.4 -10.9
carbon source carbon source D-Glucose 0.25mM +0.1 -1.4 -1.6 +0.2 -10.2
carbon source carbon source D-Glucose 1mM -0.0 -1.8 -0.3 -0.1 -10.7
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.0 -0.7 -0.5 -0.5 -11.1
carbon source Ying_Nucleobase14 rep B; time point 2 -0.1 -0.7 -1.2 +0.2 -10.9
carbon source carbon source D-Mannose 1mM -0.1 -1.6 -1.8 +1.2 -10.4
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 -0.6 -0.2 -1.1 -10.8
carbon source carbon source D-Glucose 1mM -0.1 -1.6 -0.0 -0.2 -10.5
carbon source carbon source D-Glucose 0.5mM +0.0 -1.8 -0.3 +0.3 -10.7
M9 Glucose 2% aerobic -0.1 -4.2 -1.6 -1.0 -5.3
carbon source Ying_sugar7 rep A; time point 2 -0.0 -0.8 -0.6 +0.3 -11.0
carbon source Ying_OrganicAcid7 rep B; time point 3 +0.0 -0.6 -0.5 +0.1 -11.0
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.2 -0.6 -0.5 +0.0 -10.8
carbon source Ying_Nucleobase14 rep A; time point 2 -0.0 -0.7 +0.4 -0.2 -11.1
carbon source Ying_Nucleobase14 rep A; time point 3 -0.1 +0.2 -0.4 -0.4 -10.8
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.1 -0.7 -1.6 -0.0 -8.9
carbon source Ying_sugar7 rep C; time point 2 -0.1 -0.2 -0.1 +0.0 -11.0
carbon source Ying_sugar7 rep B; time point 2 -0.0 -0.8 +0.5 +0.1 -11.0
carbon source Ying_sugar7 rep C; time point 3 -0.0 -0.7 -0.5 +0.9 -10.8
carbon source Glycolic Acid (C) +0.0 -2.7 -0.2 +0.1 -8.1
carbon source Ying_Nucleobase14 rep B; time point 3 -0.0 -0.3 +0.2 +0.0 -10.7
carbon source Ying_sugar7 rep A; time point 3 +0.1 +0.7 -0.5 +0.1 -10.9
carbon source Ying_sugar7 rep B; time point 3 +0.1 -0.1 +0.1 +0.6 -10.9
carbon source a-Ketoglutaric (C) -0.0 -2.4 -0.3 +0.4 -7.8
phage RB68 +8.9 +1.0 +0.1 +0.4 +0.4
phage RB68 +10.1 +1.4 +1.0 -1.5 +0.3
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