Fitness for 5 genes in Escherichia coli BW25113

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1246 experiments or choose conditions or try the comparative fitness browser

500 ntphoP and purB are separated by 168 nucleotidespurB and hflD are separated by 3 nucleotideshflD and ycfB are separated by 35 nucleotidesycfB and ymfB are separated by 53 nucleotides b1130: phoP - DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI), at 1,188,999 to 1,189,670 phoP b1131: purB - adenylosuccinate lyase (NCBI), at 1,189,839 to 1,191,209 purB b1132: hflD - hypothetical protein (NCBI), at 1,191,213 to 1,191,854 hflD b1133: ycfB - orf, hypothetical protein (VIMSS), at 1,191,890 to 1,192,996 ycfB b1134: ymfB - bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI), at 1,193,050 to 1,193,511 ymfB
Group Condition b1130 b1131 b1132 b1133 b1134
phoP purB hflD ycfB ymfB
carbon source Dodecanol and Rhamnolipid (C) -7.1 N.D. -0.0 N.D. -0.9
sulfur source M63 no sulfur + 5 mM L-cys -7.6 N.D. -0.0 N.D. -0.3
stress octanol 0.08 vol% -6.8 N.D. -0.0 N.D. +0.1
carbon source Dodecanol (C) -5.5 N.D. -0.3 N.D. -0.8
sulfur source M63 no sulfur + 5 mM L-cys -6.2 N.D. -0.1 N.D. -0.3
carbon source D-Xylose (C) -5.0 N.D. -0.2 N.D. -1.1
carbon source D-Ribose (C) -5.4 N.D. +0.1 N.D. -0.8
sulfur source M63 no sulfur + 5 mM sulfate -5.7 N.D. -0.2 N.D. -0.2
carbon source Glycerol (C) -3.9 N.D. +0.2 N.D. -2.2
carbon source Dodecanol and Rhamnolipid (C) -5.9 N.D. -0.1 N.D. +0.1
carbon source D-Mannose (C) -5.1 N.D. -0.3 N.D. -0.3
carbon source NAG (C) -5.4 N.D. +0.0 N.D. -0.3
carbon source Dodecanol (C) -6.1 N.D. -0.0 N.D. +0.4
carbon source D-Ribose (C) -5.3 N.D. +0.1 N.D. -0.6
nitrogen source D-Alanine (N) -5.9 N.D. +0.0 N.D. +0.2
carbon source D-Trehalose (C) -5.2 N.D. -0.8 N.D. +0.4
carbon source L-Malic (C) -4.9 N.D. -1.1 N.D. +0.5
carbon source D-Sorbitol (C) -5.6 N.D. +0.3 N.D. -0.0
carbon source D-Glucosamine Hydrochloride (C) -5.1 N.D. +0.3 N.D. -0.5
stress undecene 5 vol% -5.1 N.D. +0.4 N.D. -0.4
nitrogen source Glycine (N) -5.2 N.D. +0.4 N.D. -0.2
sulfur source M63 no sulfur + 5 mM sulfate -5.3 N.D. -0.2 N.D. +0.4
carbon source D-Maltose (C) -4.5 N.D. +0.5 N.D. -1.0
carbon source D-Glucosamine Hydrochloride (C) -5.4 N.D. +0.2 N.D. +0.3
carbon source a-Ketoglutaric (C) -5.4 N.D. +0.3 N.D. +0.3
carbon source L-Malic (C) -4.1 N.D. -1.2 N.D. +0.9
carbon source a-Ketoglutaric (C) -5.0 N.D. -0.1 N.D. +0.7
stress Chloramphenicol 0.001 mg/ml -5.0 N.D. -0.1 N.D. +1.1
nitrogen source D-Serine (N) -4.8 N.D. +0.0 N.D. +1.2
stress Cobalt chloride 0.32 mM -4.5 N.D. +0.0 N.D. +1.2
remove
b1130
plot		 remove
b1131
plot		 remove
b1132		 remove
b1133
plot		 remove
b1134
plot